Shewanella sp. WE21: CKQ84_00945
Help
Entry
CKQ84_00945 CDS
T05404
Name
(GenBank) FAD-linked oxidase
KO
K18930
D-lactate dehydrogenase
Organism
shew
Shewanella sp. WE21
Pathway
shew00620
Pyruvate metabolism
shew01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
shew00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
CKQ84_00945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD-oxidase_C
FAD_binding_4
Fer4_8
Fer4_7
Fer4_17
CCG
Fer4_16
Fer4
Fer4_9
Fer4_10
Fer4_4
Fer4_21
Fer4_2
Fer4_6
Fer4_3
Motif
Other DBs
NCBI-ProteinID:
AVI64559
LinkDB
All DBs
Position
233249..236053
Genome browser
AA seq
934 aa
AA seq
DB search
MSINYKLVIDDLRTQLGDHPVTDDPVRRFAWSTDASYFRIVPEVVVHAETLEQVKLTLAV
ARKHDAPVTFRAAGTSLSGQAIGEGILLILGHDGFRKIEVSSDAKQITLGAAVIGSDANA
VLAPLNRKIGPDPATIGSAKIGGIVANNASGMCCGTAQNSYQTIASAKLLFADGTELDTG
CEKSKAAFVKSHGKILDALTELSHMTRHNTVLADRIRKKYSIKNTTGYGINSLLDFTDPF
DIINHLMVGMEGTLAFINEVTYHTVNEAKFKASAMAVFHNMEDAARAIPLINGESVSAAE
LLDWPSIKAVTGKPGMPDWLSELPALSAILLIESRADDDKTLENYTQDVTAKLAGFDFIR
PMEFSTNPAVYDKYWAMRKGLFPIVGGERPKGTSVIIEDVAFELEHLAAAAHDITELFHK
HGYPEGCIYGHALAGNFHFIITPTFSTQADIDRFHAFMDDIADMVINKYDGSMKAEHGTG
RAVAPFVEKEWGQDAYTLMKSIKQVFDPQGILNPGVILNDDSNVHVKNIKPCPVVDDFVD
KCIECGFCEKTCPTSALNFSPRQRIATLREIERLEQSGDKAAAAEMRAAAKYDVVDTCAA
CQLCTIACPVDNSMGQLVRKLRTPYISTTEQKVLDFQAKHFGAVNQVISSGFDMLGVIHK
ITGDNITSALMKTGRLISKEVPYWNPDFPKGGKLPKPSPAKVGQETVVYFPACGGRTFGP
TPKDPDNRTLPEVVVTLLERAGYNVITPEKTRDLCCGQMWESKGDFKNADAKRQELIDAV
SKMTNGGKLPVIVDALSCTYRTLSGNPKVQIIDLVEFMHDKLLTKLNISKKVNVALHLGC
SARKMKLEPKMQAIADACSTQVLKPAGIDCCGYAGEKGLYKPEINASALRNIKKLIPVEI
KEGYYANRMCEVGLTQHSGISYRHLAYLLEECSR
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgtcgattaactataaactggtcatcgatgatctaagaacgcaattaggtgatcatccc
gtgacggatgatcccgttcgccgttttgcctggtccaccgatgcaagctacttcaggata
gtcccagaagtggttgtccatgcagaaaccctagaacaggtaaagctcacattagccgtt
gcccgtaagcatgatgcacccgtcacgtttagggccgctggaaccagtttatctggccaa
gctatcggtgaaggtattttgttgatccttggccatgatggttttagaaagattgaagtc
agtagcgatgccaaacagatcaccttaggtgctgctgtcattggttccgacgctaacgcc
gtactcgcgccgcttaaccgcaaaattggtcccgatcccgccaccataggttccgccaaa
attggtggtattgtggcaaacaatgcttcgggaatgtgctgtggtactgcgcaaaacagt
taccaaactatcgcttccgcgaaacttctttttgcagatggtactgaactcgatacaggc
tgtgaaaaatcaaaagctgcctttgttaaatcccatggaaaaatactggatgcgctgaca
gaactgtcgcacatgactcgccataacacagtgttagcggacagaattcgtaaaaagtat
tccattaaaaataccaccggctacggcatcaattcgttactcgattttaccgacccattt
gacatcatcaaccacttaatggtggggatggaaggcaccttagcctttattaatgaagtc
acttatcacacagtgaatgaagctaaatttaaagcctcagctatggccgtattccataat
atggaagatgccgcacgagccataccactgataaacggtgaaagcgtttctgctgctgaa
ctccttgattggccatcaatcaaagcagtaacgggcaagcctggcatgccagattggtta
tcagaattaccggccctatccgctattctactgatagaatcccgtgctgatgacgacaaa
accttagaaaattatactcaagatgtcaccgcgaaactcgccggctttgactttatccgc
ccaatggaatttagtactaatccagcggtttatgacaaatactgggcaatgcgcaaaggc
ttgttcccgattgtaggtggtgagcgtccaaagggaacctcagttatcatcgaagacgtg
gcctttgaactagagcaccttgctgcggcggcgcacgatatcactgagcttttccataaa
catggttaccctgaaggctgtatttatggccatgctcttgcggggaacttccactttatc
attacccccaccttctcgactcaagccgatatcgatcgtttccatgcctttatggatgat
attgccgacatggtgattaacaagtacgacggttcaatgaaagccgagcatggtactggc
cgtgctgtcgcgccgttcgtcgaaaaagaatggggacaagatgcttacactttgatgaag
agcatcaaacaagtatttgatccacagggcattctaaacccaggcgttattcttaacgac
gatagcaatgtccacgttaaaaacatcaagccctgccctgtggtcgatgattttgttgat
aaatgtatcgaatgtggtttctgtgaaaaaacctgcccaacatcggcactcaacttctca
cctcgtcaacgtattgcgactctgcgtgaaatagaacgtttagaacaatccggtgataaa
gccgcagcagcagaaatgcgcgccgcagctaaatacgatgtagttgatacctgtgccgcc
tgccagctttgtactattgcttgcccagtggataacagcatgggccaactggtgcgtaaa
ctgcgcacgccgtacatcagcactactgaacaaaaagtcttagatttccaagccaaacac
tttggcgcagttaaccaagttatcagttcaggttttgacatgcttggcgtgatccacaag
atcactggcgataacattaccagtgccctaatgaaaaccggccgtttgatttcaaaagaa
gtgccttattggaaccccgatttcccgaaaggcggcaaattgccaaaaccatcccccgct
aaagttggccaagaaacagtggtttacttcccagcctgcggcggcagaacctttggtccg
acgccaaaagatcccgataaccgcactttgcctgaggtggtcgtcacgctgctggaacgt
gctggctataacgtcatcacgccagaaaaaacccgcgatttatgttgcggccagatgtgg
gaatctaagggcgactttaaaaacgccgatgccaaacgccaagaacttatcgatgcagtg
agcaagatgaccaatggtggtaagctgccagtgatcgtcgatgccctgtcttgcacctac
cgcactttgtcaggtaatccaaaagtacaaattatcgacttagttgagtttatgcacgac
aagctactgactaagctcaacatcagcaaaaaagtcaatgtggcattgcacttaggttgt
agcgcacgcaagatgaaacttgaacctaagatgcaagcaatcgccgatgcctgctctaca
caagtgctcaaacctgcgggaattgactgctgcggttacgcgggtgaaaaaggcttgtat
aagcctgaaatcaacgccagcgcactgcgtaatattaaaaagctcattcctgtcgagatt
aaggaaggctattacgccaaccgtatgtgcgaagtcggtttgacccaacacagcggcatt
tcctaccgccacttagcttatctgctcgaagagtgcagccgctaa
DBGET
integrated database retrieval system
