KEGG   Shewanella sp. WE21: CKQ84_01525
Entry
CKQ84_01525       CDS       T05404                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
shew  Shewanella sp. WE21
Pathway
shew02024  Quorum sensing
shew03060  Protein export
shew03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:shew00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    CKQ84_01525
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    CKQ84_01525
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    CKQ84_01525
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:shew02044]
    CKQ84_01525
Enzymes [BR:shew01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     CKQ84_01525
Secretion system [BR:shew02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   CKQ84_01525
  Eukaryotic Sec-SRP protein
   CKQ84_01525
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA Zeta_toxin AAA_22 cobW KTI12 AAA_33 AAA_24 AAA_30 YqeC AAA_16 FliD_C AAA_31 AAA_14 APS_kinase Helicase_RecD TsaE Thymidylate_kin ArsA_ATPase
Other DBs
NCBI-ProteinID: AVI64662
LinkDB
Position
complement(381909..383282)
AA seq 457 aa
MFENLTDRLSRTLKNISGRGRLTEENVKETLREVRMALLEADVALPVVREFVNNVKERAV
GQEVSKSLSPGQAFIKIVQSELEKSMGEANEALDLATQPPAVIMMAGLQGAGKTTSVAKL
GKFLRERHKKSVLVVSADVYRPAAIKQLETLAQEVAVEFFPSDVSQKPIDIAKAAIAHAK
LKFIDVVILDTAGRLHVDEAMMDEIKGLHAAVKPIETLFVVDAMTGQDAANTAKAFNEAL
PLTGVILTKVDGDARGGAALSIRHITGKPIKFLGVGEKTDALEPFHPDRIASRILGMGDV
LSLIEEVERGVDKEKAMKLASKVKQGGSFDLEDFREQLQQMKNMGGMMNMLEKLPGVGQL
PPEALAQIQDGKMTGQMEAIINSMTSKERKNPDLIKGSRKRRIAAGSGTQIQDVNRLLKQ
FTQMQKMMKKMSAKGGMQKMMRGMRGMMPPGMKFPGR
NT seq 1374 nt   +upstreamnt  +downstreamnt
atgtttgagaacctaaccgacagactgtcacgcacactgaaaaatatcagtggccgtggt
cgcttaactgaagaaaacgttaaggaaaccctgcgcgaagtgcgtatggcactgctggag
gccgatgttgccctgcctgtggtgcgcgaattcgttaataacgtaaaagaacgtgccgtt
ggccaagaagtctctaaaagcttaagcccaggtcaagcctttattaagatagttcaaagt
gaacttgaaaaatccatgggcgaggcgaatgaagccctagatttagccactcagccgcca
gctgtgattatgatggcgggtctgcaaggtgcgggtaaaaccaccagtgtggccaaactg
ggtaaatttttacgtgaacgccataaaaaatcggtattagtcgtcagtgctgacgtttat
cgccctgcggcgattaaacagcttgagacgttagcgcaagaagtggcggtggagtttttc
ccatcggacgttagccaaaagccaatcgacattgcgaaagcggcgattgcccacgctaaa
ttaaagtttatcgatgtggtgatcctcgataccgcgggtcgtctgcatgtcgacgaagcc
atgatggacgagatcaaaggcttacacgcagcggttaagcctatcgaaaccttgttcgtt
gttgatgctatgacaggtcaagatgcggcaaacaccgctaaggcgtttaacgaagcttta
ccactgacaggggtgatcttaaccaaagtcgatggtgatgcgcgcggtggtgcggcgtta
tcgattcgccacattacgggcaagccgattaaatttctcggtgtgggtgaaaagaccgac
gcgttagagccattccatccagaccgtattgcctcacgcattttgggcatgggcgatgtg
ttatcgcttatcgaagaagttgagcgcggcgtcgataaagaaaaggccatgaagctggct
tcgaaagtgaagcaaggtggcagtttcgatttagaagatttccgtgagcagttacagcaa
atgaaaaacatgggcggcatgatgaatatgctggaaaaactgcccggtgtcggtcaattg
cccccagaagccttagcgcaaatccaagacggcaagatgacaggtcaaatggaagccatc
attaattcgatgacttccaaggagcgtaagaaccctgatttaatcaagggctcacgcaaa
cgtcgcatcgctgccggttctggcacgcaaattcaagatgtaaaccgtttattgaaacag
tttactcaaatgcaaaagatgatgaaaaaaatgtctgctaagggcggcatgcaaaaaatg
atgcgcggaatgcgtggcatgatgccgccaggaatgaaatttccgggacgttaa

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