Shewanella sp. WE21: CKQ84_01615
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Entry
CKQ84_01615 CDS
T05404
Name
(GenBank) transcriptional activator NhaR
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
shew
Shewanella sp. WE21
Brite
KEGG Orthology (KO) [BR:
shew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shew03000
]
CKQ84_01615
Transcription factors [BR:
shew03000
]
Prokaryotic type
Helix-turn-helix
LysR family
CKQ84_01615
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_30
MarR
Motif
Other DBs
NCBI-ProteinID:
AVI64680
LinkDB
All DBs
Position
complement(398555..399463)
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AA seq
302 aa
AA seq
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MLHLNYNHLYYFWMIKKKGSVAKAAEALCLTPQTITGQIRALEDRLNGSLFKRVGRTLEA
TELGELVFRYADKMFSLSYEMLDLLNYQKADAMLFEVGIADALSKALVSRVLLSVVPNDN
SMHLACYEATHESLMARLREHKLDMILSDCAGESLKYPEILSKKLGECGVSFFSAETYSA
DFPACLEQGQLLIPGRRTSLGQQLYRWFDEQNLKVSILGEFDDAAMMKAFGYLKRGIFVT
PSIYRQEVISHGMNLLGETTDVKEEYHVMFAERMIQHPAVKRLLDTDFSDLFEGLDTQVQ
QC
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgctgcacttgaattataaccacttgtattatttttggatgattaagaaaaagggctca
gtcgcgaaggcggccgaagccctatgtttaacgccgcaaacgataacagggcaaattcgt
gccttagaagataggttaaacggcagtctgttcaagcgagtcgggcggacattggaggcg
acagagttaggtgaattggtgtttcgctacgccgataagatgtttagccttagctatgaa
atgctcgatttacttaattatcaaaaagcggatgccatgttattcgaggtgggtattgcc
gatgccttatctaaagctttagtcagccgagttttattatccgtagtgcctaatgacaat
tctatgcacttagcctgctatgaggcgactcacgagagcctaatggcgcgtttacgtgag
cataaactggatatgatcctttcggattgtgcaggtgagtcactgaaataccctgaaatt
ttatctaaaaaattaggcgagtgtggcgtgagttttttctccgctgagacttatagcgct
gattttcctgcctgtttagaacaaggccagctattaatccccggccgtagaacttcactc
ggacaacagctatatcgctggtttgacgagcaaaatcttaaagtcagtatcttgggcgag
ttcgatgatgcggccatgatgaaggcctttggttaccttaaacgaggtatttttgtcaca
ccgtcgatttatcgccaagaagtgatttcccatggtatgaatttgctcggtgaaaccacc
gatgtgaaagaggaataccatgtgatgtttgcggaacgtatgatccaacatcctgcggta
aagcgattattggatacagattttagcgatctctttgaggggctcgatacgcaagtacaa
caatgctaa
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