Shewanella sp. WE21: CKQ84_02210
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Entry
CKQ84_02210 CDS
T05404
Name
(GenBank) hypothetical protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
shew
Shewanella sp. WE21
Brite
KEGG Orthology (KO) [BR:
shew00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shew02000
]
CKQ84_02210
Transporters [BR:
shew02000
]
Other transporters
Pores ion channels [TC:
1
]
CKQ84_02210
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GFIT
Motif
Pfam:
OmpA_membrane
OmpA
OMP_b-brl
Porin_4
TSP_3
PagL
DUF748
OmpW
Opacity
Motif
Other DBs
NCBI-ProteinID:
AVI68603
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Position
534415..535524
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AA seq
369 aa
AA seq
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MMKNTLKVVLLTSLLPLAASASQELTPWYVGAGLGVNNYEHVATQNGEDSPYAWDVFAGY
MFNDYFGAEIGFRDLGNADWTEAGISNDVSVKGSTLGLVGIWPLANRWSLSAEAGVMYYS
LENSQNFNNQSTSYSDSDFAPYLGAGVGYNFTDNLKLQAKYRRYEGLDDNAGASAVVPVN
ADSNYWGLELSYRFGSAAVVAPVAAAIVAAAPVDSDNDGVYDDKDQCPATPATHKVDSVG
CTIYENVKNKEDVGSIQFANDSAVVKNVYYKDIERLANYLNKNPAFTVEIAGHASNVGKP
EYNMELSDKRADAVAKILVEKYGISGSRVTSNGYGVTQPLVAGDSKEAHAANRRIEAIVT
TTTKQPVLK
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagaacacattaaaagtagtattactgacatctctgcttccactcgcagccagc
gcatctcaggaacttacaccttggtatgttggtgcaggtttaggcgttaataactatgag
cacgttgccactcagaacggtgaagacagtccatacgcttgggatgttttcgctggctac
atgttcaacgattacttcggtgctgaaatcggcttccgtgatttaggtaatgcagattgg
actgaagcaggtatcagtaatgatgtcagcgttaaaggttcaacattaggcttagtgggt
atttggcctttggctaaccgttggagcttatcagctgaagccggtgtgatgtactatagc
cttgaaaacagccaaaacttcaataaccaatccacttcttacagtgattccgactttgct
ccatacttgggtgcaggtgttggctacaacttcactgacaacttgaagttacaagctaaa
tatcgccgttatgaaggcttagatgacaacgctggtgccagtgccgtagttccagtcaat
gcagatagcaactattggggcttagaattaagctaccgcttcggttctgctgctgttgta
gctccagttgccgcagcaatcgttgcagcagcacctgttgattctgacaacgatggcgtt
tacgacgacaaagatcaatgtccagcaacaccagcaactcacaaagttgactctgttggc
tgtactatctatgaaaacgtgaagaacaaagaagacgtaggttcaatccagtttgctaac
gattctgctgtagttaaaaatgtttactacaaagacatcgaaagattagctaactatttg
aacaaaaacccagctttcactgttgaaatcgctggtcacgcctcaaatgtaggtaaacca
gaatacaacatggaattgtctgacaaacgtgctgacgccgttgccaagattcttgtagag
aaatatggtatcagcggaagccgcgtaacttctaacggttacggtgttactcagccattg
gttgctggtgattcaaaagaagctcacgctgcgaaccgtcgcatcgaagctatcgtgact
accacaacaaaacaacctgttctgaagtaa
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