Shewanella sp. WE21: CKQ84_02340
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Entry
CKQ84_02340 CDS
T05404
Name
(GenBank) ATP-dependent chaperone ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
shew
Shewanella sp. WE21
Brite
KEGG Orthology (KO) [BR:
shew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
shew03110
]
CKQ84_02340
Chaperones and folding catalysts [BR:
shew03110
]
Heat shock proteins
HSP100
CKQ84_02340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
Clp_N
AAA_5
AAA_22
AAA_16
Sigma54_activat
AAA_24
AAA_14
TniB
nSTAND3
AAA_18
ATPase_2
IstB_IS21
bpMoxR
AAA_7
NBD_SMAX1
DUF815
AAA_25
NACHT
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AVI64813
LinkDB
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Position
complement(568930..571503)
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AA seq
857 aa
AA seq
DB search
MRLDRMTNKFQLAISDAQSLALGRDHQFIEPLHLMMALLNQDSGSIHPLLTQAGIRVSAL
RSLLSQELERLPQVEGTGGDVQLSQGLIRLLNLCDKLAQKRKDKYISSELFVLAALEGAD
ALAQALKKAGATKELMEQTIEQMRGGQKVDDPNAEDQRQALKKFTIDLTERAEQGKLDPV
IGRDDEIRRTIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGIKNKRVLSL
DMGSLIAGAKYRGEFEERLKAVLNELSQEEGQVILFIDELHTMVGAGKGEGAMDAGNMLK
PALARGDLHCVGATTLDEYRQYIEKDAALERRFQKVLVDEPSVEDTIAILRGLKERYELH
HHVEITDPAIVAAATMSHRYVSDRKLPDKAIDLIDEAASSIRMQMDSKPESLDRLERRAI
QLKLEEQALAKENDEASRRRLDHLQEELRDVEAKASELNEIWRTEKAALAGTQHIKADLE
QARMDLEVARRAGDLTRMSELQYGRIPELEKQLDLASQAEMQDMTLLRNKVTEFEIAEVL
SKATGIPVSKMLEGEREKLLQMEVALHERVIGQNEAVDAVANAIRRSRAGLADPNRPIGS
FLFLGPTGVGKTELCKSLARFLFDTESALVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGG
YLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIIMTSNL
GSDIIQEGFGQVTYAEMKAAVMNVVTHSFRPEFLNRIDESVVFHPLDAANIKRIASIQIA
SLRQRLAEKDYTLEITDDALSLIAEIGFDPVYGARPLKRALQQEVENPLAQKLLRGDLLP
GKPIKVSCAGGELVFEQ
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgcgactcgatcgtatgaccaataaatttcagcttgccatctctgatgcccagtcactc
gcacttgggcgtgatcatcagtttattgaaccgctgcatttgatgatggcattgttgaac
caagattcaggttcaatccatcccttattgacccaagctggcattcgagtgagtgcgctg
cgatcgctcttgagtcaagagctggaacgcttacctcaagttgaaggtactggcggcgat
gtacaattatcccaaggtttaatccgtttattaaatctgtgcgataaattggcgcaaaag
cgtaaagataaatatatctctagcgaattatttgtattagctgcgttagaaggtgccgat
gccctcgcgcaagcgttgaaaaaagcaggcgcgaccaaagagttgatggagcaaaccatt
gaacaaatgcgtggcggccaaaaagtggatgatccgaacgctgaagatcaacgccaagcg
ttgaagaagtttactatcgatctcaccgagcgagccgaacaaggcaagttagatcctgtt
atcggccgtgacgatgaaattcgccgtacgatccaagtgttacaacgtcgcagtaaaaac
aaccccgtccttatcggtgaaccgggtgtgggtaaaacggcgattgttgaaggacttgcc
cagcgtatcgttaatggtgaagtccccgaaggcattaaaaataagcgtgtcttatccctc
gatatgggctcattgattgcgggcgctaaatatcgcggtgagttcgaagaacgtttaaaa
gcggtacttaatgagttgtcacaggaagaaggtcaagtgatcctcttcatcgacgaactg
catactatggtcggcgccggtaaaggtgaaggcgcaatggatgcggggaacatgctcaaa
cctgcgttagcgcgtggtgacttgcactgtgtgggtgcgaccacgctcgatgagtatcgt
cagtatattgaaaaagatgcggcgcttgaacgacgtttccaaaaagtgctggtggatgag
ccaagcgttgaagacaccattgctattttgcgtggactgaaagaacgttacgagctgcat
caccatgtggaaattaccgatccggcgattgtggcggcagcgaccatgtcgcaccgttat
gtgtcggaccgtaagttacccgataaagcgatcgatttgatcgacgaagcggcatcgagc
atccgtatgcagatggactcaaaacctgagtcactcgacaggctcgaacgtcgtgctatc
cagctcaaactggaggagcaagcgttagccaaagaaaatgatgaggcgagtcgtcgcagg
cttgaccatctgcaagaggaattacgtgacgttgaagcgaaagcttcagagttgaacgaa
atctggcgtactgaaaaagccgcattagcgggcactcagcacataaaagccgatctcgaa
caggctcgaatggacttagaagtggcgcgtcgtgcgggtgatttaactcggatgtctgag
ctgcaatacggtcgtattcctgaacttgaaaaacagctcgatttggcatcgcaagccgaa
atgcaggacatgacgttattgcgtaacaaggttactgagttcgaaatcgccgaagtattg
tcgaaagcgacgggaatacccgtatcgaaaatgcttgaaggcgagcgcgaaaaattactg
caaatggaagtggcgctgcatgaacgagtgatcggccaaaacgaagccgttgatgcggtc
gcgaatgcgattcgtcgtagccgcgcgggtctggcggatccaaatcgcccgattggttcg
ttcctgttcttaggcccaacgggtgtaggtaaaactgagctgtgtaaatcactggcgagg
ttcttatttgataccgaatcggctttagtgcgcattgatatgtctgagtttatggagaaa
cactcagtatcgcgtttagtgggggcgcctccaggatacgtaggttatgaagagggcggt
tacttaacggaagccgttcgtcgtaaaccttattcggtgatattgctcgacgaagtcgag
aaagcgcatcccgatgtgtttaacattttactgcaagtgcttgatgatggacgcttaacc
gatggtcaaggtcgtactgtcgattttagaaatacagtgatcatcatgacctcgaactta
ggctccgacattatccaagaaggatttggtcaagtgacctatgcagagatgaaagcggcg
gtaatgaatgtggtcactcacagtttcagacccgagtttttaaaccgtatcgatgaatct
gtggtgttccatccattggatgctgccaatatcaagcgtattgcttcgatacaaattgct
tccttacgccaacgtttggctgaaaaggactatacattggagatcaccgacgacgcatta
tcactgattgcggaaattggtttcgatcctgtgtatggtgcaagaccgttgaaacgggca
ttgcagcaagaagtcgaaaacccgctggcgcagaaattactgcgtggtgacttgttaccg
ggtaaaccgatcaaggtcagttgtgcgggtggcgagttagtgttcgagcaataa
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