Shewanella sp. WE21: CKQ84_02355
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Entry
CKQ84_02355 CDS
T05404
Name
(GenBank) outer membrane protein assembly factor BamD
KO
K05807
outer membrane protein assembly factor BamD
Organism
shew
Shewanella sp. WE21
Brite
KEGG Orthology (KO) [BR:
shew00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shew02000
]
CKQ84_02355
Transporters [BR:
shew02000
]
Other transporters
Pores ion channels [TC:
1
]
CKQ84_02355
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YfiO
TPR_18
TPR_6
TPR_9
TPR_2
TPR_19
ARM_TT21
HEAT_Nup120
TPR_P4H
Motif
Other DBs
NCBI-ProteinID:
AVI64816
LinkDB
All DBs
Position
573535..574296
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AA seq
253 aa
AA seq
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MYKFSKGVTLVLFSLALSACSSSPDDNDIAAKTSPDVLYTQARTSMELGNYSKAVRSLEA
LDSRFPFGPHKTQVQLDLIYAYYKMDDVASGIANIDRFIRLNPTHPDVDYVFYMRGLVNM
QADNYMFHDMLNIDRTDRDPKNAQDAFKDFDRLIKTYPNSKYAADAQKRMLALKNRLAKY
SIQVAEYYLKMNAWSAAAIRAQSVMETYPGTPSNERALEIMIEAYGELGQSKLKQNVLMV
MQANFPNNEILSN
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgtataaattttccaaaggcgttaccttagtcctattttcactagcgttatcagcctgt
agcagcagccctgatgataacgatattgccgccaaaacgtcacctgatgtactttatact
caggcaagaacctctatggagcttggcaattactctaaagctgtccgttctttggaagcg
ttagactcacgcttccccttcggacctcacaaaactcaagtccagttagacctgatatat
gcttactataaaatggacgatgtcgcttctggtattgcgaacatagacagatttatccgt
cttaatccaactcatccagatgtagactatgtgttctatatgcgcggtttagtgaacatg
caagccgacaattacatgttccacgacatgcttaatatcgaccgaaccgaccgtgaccct
aaaaatgctcaagatgctttcaaagattttgatcgtcttatcaaaacctaccctaacagc
aaatatgccgctgatgcgcaaaaacgcatgttagcgttgaagaatcgcttagcaaaatat
tcaattcaagttgccgagtattatctcaagatgaatgcatggagcgccgcagcaatccga
gcacaatctgtaatggaaacataccctggcaccccttcaaatgaacgggcattagagata
atgatagaagcttatggcgaattaggtcagagcaagctgaagcaaaacgtgctcatggta
atgcaagctaacttcccaaacaatgaaatcttatcaaactaa
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