Shewanella sp. WE21: CKQ84_02835
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Entry
CKQ84_02835 CDS
T05404
Name
(GenBank) ABC transporter substrate-binding protein
KO
K11688
TRAP-type transport system periplasmic protein
Organism
shew
Shewanella sp. WE21
Pathway
shew02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
shew00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CKQ84_02835
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shew02000
]
CKQ84_02835
Transporters [BR:
shew02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
CKQ84_02835
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DctP
Motif
Other DBs
NCBI-ProteinID:
AVI64903
LinkDB
All DBs
Position
complement(671165..672283)
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AA seq
372 aa
AA seq
DB search
MRKLGSLFISVLLMGLSGCNPVSSDAQSVAASHAATDVPHALPAIEWRLATSWPKNFPGL
GMAPERFAHLVDEMSNGRLKISVYGAGELMPAFAVFDGVSQGKIQMAHSASFYWRGKAPA
AQFFSSIPFGMTAQEINGWLHYGGGMELWTEVYQPFGIIPLAGGNTGMQMGGWFNKPINT
IADFKGLKVRMPGLGGEVLKRVGAVPVNMAGRELYGALQTGAIDAAEWVGPVNDLAFGLH
KVAKYYYYPGWHEPGSNMEFLINTAAFESLPEDLQAIVRVAARAINQDMLDEYTTRNVTA
LETLVKDEGVELKAFPPKVLLELEKISKQVIEEQANQDPLMRKVYDAYHTYEQGVRQYHK
ISEDAYSQQRQH
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaagttagggagtttgtttatctcagtgctgctgatgggactgagcggttgtaac
cccgtctccagtgatgcgcaaagcgtggccgcttcccatgccgcaactgatgttccccac
gctttacctgctattgaatggcgtcttgcaacctcttggccgaaaaacttcccaggttta
ggcatggctcctgagcgttttgcgcatttagtcgatgaaatgtctaacggtcggttaaag
attagcgtttatggtgcgggtgagttgatgcccgcttttgccgtatttgatggtgtgagt
cagggtaaaattcaaatggcccactccgcttctttctactggagaggaaaagcgcccgca
gcgcagtttttttcatcgatcccctttggtatgaccgcgcaggaaataaatggctggctt
cactatggtggtggtatggagctgtggactgaagtgtatcaaccctttgggataatcccc
ctcgcgggtggcaatactgggatgcaaatgggtggctggtttaataaacccatcaatacc
attgctgattttaagggattgaaggtccgcatgccgggcttaggtggtgaagtgttgaaa
cgcgttggtgctgtacctgtaaacatggcggggcgtgaactttatggtgcattgcaaacg
ggggcgattgatgccgcagagtgggtagggccagtgaatgatcttgccttcggtttacat
aaagtggctaagtactactattaccctggttggcatgagccaggttcaaatatggaattc
ttgattaataccgctgccttcgagagtttacctgaggatttacaggccatagtcagagtt
gctgcgagagccattaaccaagatatgctcgatgaatacacgacccgtaacgtgaccgcc
cttgaaacgttagtgaaggacgaaggtgtggagcttaaagcgtttccaccgaaagtcttg
ttggagcttgagaaaatttccaaacaagtgattgaagaacaagcgaatcaagatccctta
atgcgaaaggtgtacgatgcctaccacacgtatgagcaaggtgtgcgccagtaccataaa
atatctgaggatgcttacagtcagcagcgtcaacactaa
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