Shewanella sp. WE21: CKQ84_03110
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Entry
CKQ84_03110 CDS
T05404
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
shew
Shewanella sp. WE21
Pathway
shew00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
shew00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CKQ84_03110 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
shew01007
]
CKQ84_03110 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shew03016
]
CKQ84_03110 (lysS)
Enzymes [BR:
shew01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
CKQ84_03110 (lysS)
Amino acid related enzymes [BR:
shew01007
]
Aminoacyl-tRNA synthetase
Class II (A)
CKQ84_03110 (lysS)
Transfer RNA biogenesis [BR:
shew03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
CKQ84_03110 (lysS)
Prokaryotic type
Other AARSs
CKQ84_03110 (lysS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
AVI64952
LinkDB
All DBs
Position
complement(742871..744373)
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AA seq
500 aa
AA seq
DB search
MTEQVIDENKLIAERRAKLESIRPNCSANAHPNTFRRTHKAAELQAQYGQNTKEELEALG
FKTSIAGRIMAKRGPFLVIQDVSGRIQAYAEKSVQADLKERFQGLDIGDIIGVTGQLHLS
GKGDLYVNMEQYELLTKALRPLPADYYGLADQEMRYRQRYVDLIVNEDSRNAFIMRSKVV
SAIRNFMIKKEFMEVETPMMHVIPGGASARPFITHHNALDMPMYLRIAPELYLKRLVVGG
FERVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYKDLMDLTEEMLSSIAIELLGSAQM
PYGEHTVDFGGPYARLSMLEAIQKYNPDNATIQAMTYEQVKDVEFMRDLAKSLGMKIEKF
WTCGQLLEEIFGETAEWQLMQPTFITGYPADISPLARRNDDNHFITDRFEFFIGGREVAN
GFSELNDAEDQDNRFKAQVDAKDAGDDEAMFYDADYITALEHGLPPTAGQGIGIDRLVML
FTNTHTIRDVILFPAMRPQA
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgactgaacaagtaattgatgagaacaaactgatcgccgagcgccgtgccaagctagaa
agcatccgcccaaattgtagtgctaatgcccatccaaataccttccgtcgcacccataaa
gcggctgaattacaagcacagtatggtcaaaacactaaagaagaactcgaagccttaggt
tttaagaccagcattgctggccgcatcatggcaaaacgtggtcctttcttagtgatccaa
gacgtgtctggtcgtattcaagcttatgctgaaaaaagcgtacaagctgacttgaaagag
cgttttcaaggtctggatatcggtgacattatcggtgtaaccggtcagttgcatttgtct
ggcaaaggcgatttatatgtcaacatggaacagtacgagctactgaccaaggcgctgcgt
ccattgcctgcggactattatggtctcgccgatcaagaaatgcgttaccgtcaacgttac
gtggatctcatcgttaacgaagattcgcgcaatgccttcatcatgcgttctaaagtggtt
tctgcaatccgtaactttatgatcaaaaaagagttcatggaagttgaaaccccgatgatg
cacgtgatcccaggtggtgcttcggcccgtcctttcatcacccatcacaacgccttagac
atgccaatgtatctgcgtatcgcgccagaattatatctgaagcgtttagtggtaggtggt
tttgagcgtgtgttcgaaatcaaccgtaacttccgtaacgaaggtctgtcgccacgtcat
aacccagaattcactatgatggaattctatatggcttatgcagactacaaagatctgatg
gacctcaccgaagaaatgctcagctcgattgctatcgaactgcttggcagtgcgcaaatg
ccatacggcgagcacacagtcgatttcggtggtccatacgcacgtttaagcatgttagaa
gcgattcagaagtacaatcctgataacgccactatccaagcgatgacctatgagcaagtg
aaagatgttgaattcatgcgcgatttggcgaaaagcttaggtatgaagattgagaaattc
tggacttgtggtcagctgcttgaagaaatcttcggtgaaactgctgaatggcaattgatg
caaccgacgttcatcactggctacccagcggatatttcaccattggcacgtcgtaatgat
gacaaccatttcatcactgaccgtttcgaattcttcatcggtggccgtgaagtggctaac
ggctttagcgagctgaacgatgctgaagatcaagacaaccgctttaaagcacaggttgac
gcgaaagatgcaggtgacgatgaagctatgttctacgatgcagactatatcactgcactg
gaacacggtttgccaccaacagcaggtcaaggtatcggtatcgaccgtttagtgatgttg
ttcactaacactcatactatccgtgacgtgatcctgttccctgccatgcgcccacaggcg
taa
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