Shewanella sp. WE21: CKQ84_03535
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Entry
CKQ84_03535 CDS
T05404
Name
(GenBank) cysteine desulfurase CsdA
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
shew
Shewanella sp. WE21
Pathway
shew00450
Selenocompound metabolism
shew01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
shew00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
CKQ84_03535
Enzymes [BR:
shew01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
CKQ84_03535
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
CKQ84_03535
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Aminotran_1_2
Cys_Met_Meta_PP
Choline_kinase
Motif
Other DBs
NCBI-ProteinID:
AVI68618
LinkDB
All DBs
Position
844921..846270
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AA seq
449 aa
AA seq
DB search
MTQPASPTPNTVTHTATNTTADIETAHASANAIPDTTVTLSSSEAYQLNAQIRSQFPALN
QLLDGYPLCYLDTAATSQKPQMVLDAMAQFYANDNANVHRAAHQLSARSTLSYEKVRDQL
QQFLKAKRREEIIFTHGTTESINLVAFGLTAQLSAGDVILIDAAAHHANIVPWQELVKRT
GAIIKPIPLCQDCRLDIIAYKTLLELKPKIVALCHVSNALGTVNPVAQLVQLAKKQGAIT
LVDGAQAVAHLTLDVTEIDCDFYVFSGHKMYGPTGVGVLYGRFDALDSLAPLLTGGEMIK
RVSFEATEFGNLPNRLEAGTPPIAEVIGLGAAITFLQTELMPQVQAYEAELINYLQSQLR
ALGEVHLYGAFDDNIGVVAFNLAGEHHQDVGILLDQQGVAVRCGHHCAMPLMQSLNLKGC
CRASIGIYTNKDDIDRFIAALTSVKDLLL
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgactcaacctgcatcgcctacgccaaatactgtgactcacacagcgacgaatacaacg
gctgacattgaaacagcccatgcctcggcgaatgctatacctgataccacagtgacactt
agctcatctgaggcatatcagctaaatgctcagattcggtcgcaattcccagcgttaaat
caactgcttgatggttatcccctatgttatctcgacacagcagccaccagccagaaaccg
caaatggtgttagatgccatggcgcagttttacgctaacgacaatgccaatgtacaccgt
gctgcgcatcagttatcagcgcgttcgaccttaagctatgagaaagtgcgcgatcagttg
cagcaatttttgaaggcaaaacgccgcgaagaaatcatttttacccacggcaccacagaa
tcaatcaacttagtcgcctttggactgactgcccaattaagcgctggcgatgtgatatta
atcgacgccgccgctcaccacgccaatatagtgccttggcaggaactggtgaaacgcaca
ggggcaatcattaaaccaatcccgctctgtcaggattgccgcttagatatcatcgcctat
aaaaccttgctcgagttaaagcctaaaatcgtcgccctgtgccatgtttccaacgcccta
ggtacagtcaatcccgtggctcagctagtgcagttagcgaaaaaacaaggtgctatcacc
ttagttgatggcgcacaggcagttgcgcatttaacgttggatgtgactgaaatcgattgt
gatttttacgtcttctcagggcataaaatgtatggtcccactggtgttggcgtgctttac
ggccgtttcgacgcgttagatagtctcgcgccactattaactggcggcgagatgattaaa
cgcgtgagttttgaagcgacagaatttggcaacctgccgaatcgcttagaagcgggcacg
ccgccgattgctgaagtcataggtttgggcgcggccattacatttttacaaaccgagctc
atgccgcaggttcaagcttatgaagcagaactaattaactatttacaaagccaattgcgc
gcgctcggtgaagtgcatttatacggcgcctttgatgacaatatcggtgtagtcgcgttt
aatcttgccggtgaacatcaccaagatgtaggcattttactggaccaacaaggggttgcc
gttcgctgtggccatcattgtgccatgccattaatgcagagcctgaatcttaagggctgt
tgccgcgcctctatcggtatctacaccaataaagacgatatcgaccgctttattgccgcg
ttaacctcggtaaaagacttgctgctgtaa
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