Shewanella sp. WE21: CKQ84_03700
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Entry
CKQ84_03700 CDS
T05404
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
shew
Shewanella sp. WE21
Pathway
shew00541
Biosynthesis of various nucleotide sugars
shew01100
Metabolic pathways
shew01250
Biosynthesis of nucleotide sugars
Module
shew_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
shew00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
CKQ84_03700
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
shew01005
]
CKQ84_03700
Enzymes [BR:
shew01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
CKQ84_03700
Lipopolysaccharide biosynthesis proteins [BR:
shew01005
]
Lipid A
CKQ84_03700
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
POLQ_helical
Motif
Other DBs
NCBI-ProteinID:
AVI65056
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Position
complement(879802..880650)
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AA seq
282 aa
AA seq
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MSNKIINLGSIEIANDKPFVLFGGMNVLESRDLAMSIAETYAEVTQKLGIPYIFKASFDK
ANRSSINSYRGPGMEEGLKIFEEIKKTFNLPLITDVHEVHQCAPVAEVVDIIQLPAFLAR
QTDLVVAMAKTGAIINVKKPQFLAPHEMRHIITKFNEAGNDEIILCERGSSFGYNNLVVD
MLGMDEMKQSGYPVIFDATHALQRPGGRADSAGGRRAQATELARSGMALGLAGLFIEAHP
DPDNAKCDGPCALPLHQLENYLKQMKAIDDLVKSFEPIDTSK
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgagtaataaaatcataaacctaggttcaatcgagattgccaacgataaacctttcgtg
ttgtttggtggcatgaatgtgcttgagtctcgcgatcttgctatgtcgattgctgaaacc
tacgccgaagtgactcaaaagctggggatcccttatatatttaaggcgtcttttgataag
gcgaatcgttcttcgattaactcttaccgcggtccaggtatggaagaaggcttaaagatt
tttgaagagattaaaaagacctttaatttacctttgatcaccgatgtgcatgaagtgcat
cagtgtgcgccagtggcagaagtagttgatattattcagttacctgcatttctagcacgc
cagactgatttggttgtcgcgatggcaaaaactggcgctatcatcaatgtgaaaaagcca
cagtttttagcaccacatgaaatgcgccatatcatcactaagtttaacgaagcgggtaat
gacgagatcatcctgtgtgaacgtggttcaagctttggatataacaacttagtcgttgat
atgttgggcatggatgagatgaagcaatctggctacccagtgatttttgatgcgactcat
gcgctgcaacgccctggtggtcgtgcagattcagcgggtggacgtcgcgcacaggcgacc
gagttagcgcgcagtggtatggcgctgggtttagcgggtctattcattgaggcgcacccc
gatcctgataacgctaagtgtgatggcccatgtgcgctacctttgcatcagttagaaaat
tatctgaagcaaatgaaagcgatcgacgatttggtgaaatccttcgagccaatcgatacc
agtaagtaa
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