Shewanella sp. WE21: CKQ84_03775
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Entry
CKQ84_03775 CDS
T05404
Name
(GenBank) 16S rRNA pseudouridine(516) synthase RsuA
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
shew
Shewanella sp. WE21
Brite
KEGG Orthology (KO) [BR:
shew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shew03009
]
CKQ84_03775
Enzymes [BR:
shew01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
CKQ84_03775
Ribosome biogenesis [BR:
shew03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
CKQ84_03775
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
eIF4G1-like_eIF4E-bd
Motif
Other DBs
NCBI-ProteinID:
AVI68621
LinkDB
All DBs
Position
complement(894630..895319)
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AA seq
229 aa
AA seq
DB search
MRLDKFICESTSLTRSLAKKALHRGDITCDGLVVKDSGFKVTEGMCVCLEGEPIVLVGER
YLMLNKPVDTICSTIDETYPSVLSLVDVPKPETLHIAGRLDADTTGLVLITSDGQWSHKI
TSPKKECGKRYLVQLAEPVDASLIAVFAAGVELRGEDGLTKPALLEIIDPQLVRLTITEG
KYHQVKRMFAAVGNHVQGLHRESVGQIELDPTLALGEWRYLTAEEIASV
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtttagacaaatttatctgtgagagtacctcattgactcgctcattagcgaaaaaa
gccctgcatcgcggtgatattacttgtgatggcttagtcgttaaagactcgggttttaaa
gtgactgaaggtatgtgtgtttgccttgaaggcgagccgattgtcttagtgggcgagcgt
tatttaatgcttaacaaaccggtagacactatttgctcgacgatagatgaaacctaccct
tcggtattgagcttagtggatgtacctaagccagaaactctgcacattgctggtcgttta
gatgccgatactacagggctagtgttgattaccagtgatggtcaatggtcgcataagatc
acctcaccgaagaaagaatgtggcaaacgctatttagtgcaactcgctgagcctgtggat
gctagtttgattgcggtatttgccgctggcgttgaattgcgcggtgaagatggtctaact
aagccagcgttactggagattattgatccacaattagtgcgattaaccatcaccgaaggt
aagtatcatcaagtgaagcgtatgtttgccgctgtgggcaatcatgtgcaagggttgcat
cgtgaaagtgtagggcaaattgaattagaccccaccttagcactgggtgaatggcgatat
ttgacggctgaagagatagcttcagtctga
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