Shewanella sp. WE21: CKQ84_03880
Help
Entry
CKQ84_03880 CDS
T05404
Name
(GenBank) pyrimidine-specific ribonucleoside hydrolase RihA
KO
K01250
pyrimidine-specific ribonucleoside hydrolase [EC:3.2.2.-]
Organism
shew
Shewanella sp. WE21
Pathway
shew00240
Pyrimidine metabolism
shew01100
Metabolic pathways
shew01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
shew00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
CKQ84_03880
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IU_nuc_hydro
Motif
Other DBs
NCBI-ProteinID:
AVI65091
LinkDB
All DBs
Position
921998..922954
Genome browser
AA seq
318 aa
AA seq
DB search
MTRPIILDCDPGHDDAIALILALAHPELVPLAVTTSAGNQTPDKTLNNALRILTLLNRSD
IPVAGGAVKPLARELIIADNVHGETGLDGPALPNPSFSPQAITAVELMAQQIRQSHQPVT
LIPTGPLTNIALLLASHHELHAKIERIVLMGGAAGVGNWTPAAEFNIFVDPEAADIVFKS
GIPITMCGLDVTHQAQIMDEDIERIRAIQNPIAQCVAELLDFFMIYHRDPKWGFIGAPLH
DPCTIAWLLKPELFEAQDCWVSIETQSELTLGMTVVDRYQLTGKAANATVLFGIDRQGFV
DLLVDSLRVYDATYLNRR
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgactcgccctattattctggattgcgatcccggccatgacgacgctattgcgctcatt
ttagctctcgcccatccagagctggttccactggccgtcaccaccagcgccggtaaccaa
acgccggataaaacgctcaataatgccctgcggatcttaaccttattaaatcgcagtgat
attcctgtcgctggcggcgccgtcaagccattagctcgcgaattaatcattgccgacaat
gttcatggtgaaaccggactcgacggccctgcattgcctaatccaagttttagtcctcaa
gccattaccgcagttgaattaatggcgcagcaaattcgccaaagtcatcagccagtaacc
ttaattcccacaggaccactcaccaatatcgcgcttttgctcgccagccaccacgaatta
cacgccaagatcgaacgcatagtgctaatgggcggtgcagccggtgtcggtaattggacg
cctgccgccgaatttaatatttttgtcgaccccgaagccgccgatattgtctttaaatcc
ggtattcccattactatgtgtgggctcgatgtgactcatcaggcgcaaatcatggatgaa
gacatagaacgcattcgcgcgattcaaaatccaattgctcagtgcgtcgccgaattattg
gatttctttatgatttaccacagagatcctaaatggggctttattggtgcgccattgcac
gacccctgcactatcgcttggttgctcaaacctgagctatttgaggcgcaagattgctgg
gtaagtattgaaacccaaagtgagttgaccttaggcatgacagtggtcgatcgctatcag
ctaacaggtaaagccgccaatgcgactgtgctgtttgggatcgataggcaaggctttgtc
gatttactggtagacagtttacgcgtctatgatgcaacttatctcaatcgcagataa
DBGET
integrated database retrieval system
