Shewanella sp. WE21: CKQ84_03970
Help
Entry
CKQ84_03970 CDS
T05404
Name
(GenBank) chemotaxis protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
shew
Shewanella sp. WE21
Pathway
shew02020
Two-component system
shew02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
shew00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CKQ84_03970
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
CKQ84_03970
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
shew02035
]
CKQ84_03970
Bacterial motility proteins [BR:
shew02035
]
Flagellar system
Chemotaxis proteins
MCPs
CKQ84_03970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
sCache_2
dCache_2
HAMP
Cache_3-Cache_2
dCache_1
BLOC1_2
LOR
Tropomyosin
Fib_alpha
DUF1664
AI-2E_transport
Motif
Other DBs
NCBI-ProteinID:
AVI65106
LinkDB
All DBs
Position
941045..942709
Genome browser
AA seq
554 aa
AA seq
DB search
MSNFSLRNKLLLLSLFPLIFTLFVLMTVSYYVEKDALADEVTTFRTKLIGERKTQIKEAT
EIAAGIVQYQLSLKENGNVNQALRDIRFGSSGYFFIYDSQGKNLFHAVMPNLEGQNKIDM
TDPRGTKIIVGLLDAAKKGDGNFSFYFQKPNTNEQIEKIGYSMMIPGTDWMLGTGVYIDD
IDTVVEDYRATVTEQMIEKSYAILLIALLLAAITTVVILITAQRMVAPIKNMANNLNDIA
KGEGDLTKRLIVKGEDEIAQLGQSFNLFVDKLQTIIGDVANATAKVKTAANAIHDQTKVM
SSQLISHNNETDQVVTAITEMSATASEVAQNTTQVAEATHAATGDVANAQRCVDASLEEI
SALMAQINNAAGSIQSLSEQSKKINNVLSVIGGIAEQTNLLALNAAIEAARAGEQGRGFA
VVADEVRNLASRTQSSTLEINEMLTELHKLVALAVKTMEESQQSCVRSVDSSRAISESLG
SVTSAVTAINDMSTQIATAATEQSSVTEEINRNVFAIQEIVNELLHSSEDAARVSQTVSQ
EGINLGKLVGQFKI
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgtctaatttcagcctacgtaataaattactgctgttgtcgttattccctttaattttt
actttgttcgtactcatgacagtttcttactatgtcgaaaaagacgcccttgcagatgaa
gtgacgacctttagaactaagctcatcggtgaacgtaaaacacaaataaaagaagccacc
gaaattgccgcaggaatagtgcagtatcagttgtctttaaaagaaaatggcaatgtaaac
caagcgctacgtgatatccgttttggcagttctggttacttctttatttacgactcccaa
ggtaaaaacctgttccatgccgtcatgcctaacctcgaagggcaaaataaaattgatatg
acagatccccgcggcactaaaatcattgtcggtttactcgatgccgctaaaaaaggggac
ggtaacttctcgttctactttcaaaaacccaataccaatgagcaaattgaaaaaatcggt
tactccatgatgatccctggcacagactggatgctaggcacgggagtctatatcgatgat
atcgacactgtcgttgaggattatcgtgcgacggtcactgagcagatgatcgaaaaatcc
tatgccattctgttaattgcgctgttactcgccgcgattactaccgttgttattctgatc
accgcccaacgtatggtcgcaccaattaaaaatatggcgaataacttaaacgatatcgct
aaaggcgaaggcgatttaaccaaacgtcttattgtgaaaggtgaagatgaaattgcacaa
ctcggccaatcctttaacctgtttgtcgataaactccaaaccatcataggcgatgtggca
aacgcgacggctaaagttaaaaccgccgccaacgcgattcacgatcaaaccaaagtcatg
tcgagccaactcatcagccataacaatgaaactgatcaagtggttaccgccatcactgaa
atgtcagccaccgccagcgaagtagcgcaaaatactacgcaagtggctgaagcgactcac
gctgccactggcgatgtagccaatgctcagcgctgcgtcgatgcttctttagaagaaatt
tcggctctcatggcgcaaatcaacaatgcggcgggcagtattcaatctttgagcgaacag
tctaaaaaaatcaacaacgtgctgtcagtgattggcggtattgctgagcaaactaaccta
ttggcattaaatgcagccatcgaagctgcccgcgccggagaacagggccgaggctttgcc
gtggtggccgatgaagtgcgtaacttagcgagccgaacccaatcaagcactttggaaatc
aatgagatgctaactgaactgcacaagcttgtcgcactggcagtaaaaacgatggaagaa
agtcagcaaagctgcgtgcgctcggtagactcttcccgtgcaatttctgaaagcctaggc
tcagtgacatcggcggtcacggctattaacgacatgagcacccaaattgcgacggcggcc
acggaacaaagctctgtaaccgaagaaatcaaccgtaatgtgttcgccatccaagagata
gtgaatgagttactccattccagcgaagatgctgccagagtcagccagaccgtgtcgcag
gaaggaattaacttaggtaagctcgtcggtcagtttaagatttaa
DBGET
integrated database retrieval system
