Shewanella sp. WE21: CKQ84_04205
Help
Entry
CKQ84_04205 CDS
T05404
Name
(GenBank) metal ABC transporter permease
KO
K24821
ATP-binding cassette, subfamily B, heavy metal transporter
Organism
shew
Shewanella sp. WE21
Pathway
shew02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
shew00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CKQ84_04205
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shew02000
]
CKQ84_04205
Transporters [BR:
shew02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
CKQ84_04205
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_22
AAA_21
RsgA_GTPase
AAA_29
AAA_15
Zeta_toxin
DUF815
MMR_HSR1
Septin
DUF87
AAA_24
AAA_10
TsaE
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AVI65147
LinkDB
All DBs
Position
complement(986152..987948)
Genome browser
AA seq
598 aa
AA seq
DB search
MRPTLYFEGPVDKLNWHVMKLLWPYLLEYKGRIALAMSCLIIAKLTSVALPFILKHLVDT
LDADKTAQALSVPVGLVLAYGAVRLLTAITGEIRDTLFGRVTERAIRRLGLAVFDHLHRL
DLDFHLERKTGGLSRDIERGTSGVSFLMRFMVFNIVPTLLEIVMVIGIFFYNYGIAFAAI
TFIAVLAYIIFSVVATEWRTEYVRDAAKADSLSNTRAIDSLLNYETVKYFNNEKYESQRY
DQALEQWEVAKRKNRLSLFALNGGQAVIIALAMTAMMALAAYRVTYGDMTLGDFVLINAF
MMQLFLPLNFLGFVYREIRGALANIERMFSLLDKHPMIVDLPQALDFQPTKGELIFENVN
FSYDERQILRDVSFKVEAGKKVAVVGDSGAGKSTLIKLLFRFYDVDQGAIKIDGQDIRHL
TQDALRRAIAIVPQDTVLFNDSLVENIRYGRPSATDEEVRNAIKLAHLEQFIASLALGWG
TKVGERGLKLSGGEKQRVAIARAILKGSPVLVFDEATSSLDSRSEQAILSALREVAKGHT
SLVVAHRLSTIVDADQIVVLSQGEIVEQGNHQTLLLANGLYAKLWRIQNEQQHTPLSS
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgcgcccaacgttatattttgaaggtccagtcgataaattaaactggcacgtcatgaaa
ctgctttggccttacttattggaatacaaaggccgtattgcgttggcgatgtcatgcctc
atcatcgctaagctgaccagcgtggctctgccttttattctgaagcatttggtcgacacc
ttagatgccgataaaactgcgcaagccctcagtgtgcccgtaggattagtgttggcctat
ggcgcggtacgtctactaacggcgattacgggggagatccgcgataccttgtttggccgc
gtaacagagcgggcgatccgccgtttaggtttagcggtattcgaccatttacaccgactt
gacctcgattttcatctagagcgcaaaaccggcggcctatcccgcgatattgaacgcggc
accagcggcgtgagtttcctcatgcgttttatggtgttcaacatagtgccaaccttgctc
gaaattgtcatggtgattggcattttcttctataactacgggattgcgtttgcggcaatc
acctttattgctgtgttggcttatattattttttctgtggtcgcgaccgaatggcgtact
gagtatgttcgtgatgcggccaaggctgactcgttatcgaatacccgcgccatcgacagc
ttgctgaactatgaaacggtaaagtattttaataatgaaaagtatgagtcgcagcgctat
gaccaagcgcttgaacagtgggaagtcgccaaacgtaaaaaccgcttatctttgtttgcg
ctcaatggtggacaagctgtgattatcgctttggcgatgacggctatgatggcgctggcg
gcatacagagttacctatggcgatatgaccttaggtgattttgtgttgattaatgcgttt
atgatgcagctctttttaccccttaacttcttaggttttgtgtatcgtgaaattcgcggc
gcgttagccaatattgagcgcatgtttagcctgctcgataaacatcctatgatagtcgac
ttaccccaagcactcgattttcaacccactaagggtgaattgatatttgaaaatgttaat
tttagctacgatgagcggcaaattctgcgggacgtgagctttaaggttgaagccggtaaa
aaggtggctgttgtaggtgatagtggtgcaggtaaatcgaccctgattaaactgctattt
cgattttacgatgtggaccaaggtgcgattaaaatcgatggacaagatatccgccatctc
acccaagatgcgctgcggcgtgccattgccatagtgccgcaggatactgtgctgtttaac
gattcattagtcgaaaatatacgttatggtcgcccaagcgcgacggatgaagaggtgcgt
aacgcgataaaactggcgcacttagagcaatttattgcatcacttgcccttggttggggc
acaaaggtgggtgagcgcggcttaaagctatctggcggagaaaaacagcgggtcgcgata
gcaagggcaattttgaagggctcgcccgtgctggtgtttgatgaggcaacatcttcactt
gatagtcgctccgagcaagctattttgtcggcactgcgggaagtcgctaaggggcacact
agcctagtggtggctcataggctatcgaccatagtcgatgccgatcaaatagtcgtatta
agccaaggagaaatagttgagcaaggtaatcatcagactttgctgttggcaaatggtctc
tatgccaaattatggcggatacaaaatgagcaacaacatactcctctgagcagttaa
DBGET
integrated database retrieval system
