Shewanella sp. WE21: CKQ84_05165
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Entry
CKQ84_05165 CDS
T05404
Name
(GenBank) ATP-binding protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
shew
Shewanella sp. WE21
Brite
KEGG Orthology (KO) [BR:
shew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shew03400
]
CKQ84_05165
DNA repair and recombination proteins [BR:
shew03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
CKQ84_05165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
ResIII
AAA_22
FtsK_SpoIIIE
TrwB_AAD_bind
AAA_30
AAA_16
AAA_25
T2SSE
CbiA
AAA_7
Motif
Other DBs
NCBI-ProteinID:
AVI65324
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All DBs
Position
1199434..1200930
Genome browser
AA seq
498 aa
AA seq
DB search
MNTLLIGKGEQQVHLNLKYANRHGLIAGATGTGKTVSLMSIAEGFSRQGVPVFITDVKGD
ISGLAMAGTPSEKLLQRATQIGIEDYHNEANPVVLWDLAGVQGHPLRTTISEMGPTLLGR
ILELNDTQSGILDIVFQLADDQGLLLLDLDDLRAMLALVAEERKEISAKYGLISAQSLAA
IQRSVLGLERDGGKDFFGEPALQLEDLMRTNLQGRGIINLLAANKLILTPRLYSSFLLWL
LSELFENLPEVGDPEKPKLVFFIDEAHLLFEGCPPSLLKRVEQIMRLIRSKGIGVYFCSQ
FPDDVPNEILGQLGNRIQHALRAYTPRDQKAVKTAAETFVPNPKLVVSDVISQLAVGEAL
VSMLADKGVPTMVERALIAPPRCRMGPATSEELQQVRVQSPIGGKYDQLINRESAYERLN
QRRVGNATSDTTSTASDAQTGQKAEEQGWFSELIFGNKRRQGLAETLSKQAARTVGSQLG
KQILRGILGGMLGKSSRR
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
ttgaatacgctattaataggaaaaggtgaacaacaggttcacttaaatcttaagtatgcc
aatcgccatgggttaattgccggtgccacagggacaggcaaaaccgtgtcgctgatgagt
attgccgaaggtttttcacgccaaggcgtgccagtttttatcacagacgttaaaggcgat
atctcgggtctagctatggccggcactccaagtgaaaagctattacaaagggcaactcaa
attggcattgaggattatcacaacgaagccaaccctgtggtgttatgggatttagcgggc
gttcaaggccacccgctgcgtaccaccatcagcgaaatgggcccaaccttactcggccga
attttagaattgaatgacacccagagcggtattttagacatagtctttcagctagcggac
gaccaagggttattactgctcgacttagatgatctgcgggccatgctggccttagttgcc
gaggaacgcaaagaaatctccgccaaatatggtttaatcagcgcccaatccctcgcagca
attcaacgttcggtactaggattagagcgcgatggtggcaaagacttttttggtgaaccc
gcgttacagcttgaagatttaatgcgcactaatttgcaagggcgcggcattatcaattta
ttagcagcgaacaaactgattttaacaccccgtttatattcaagttttttactctggcta
ctctcagaattatttgagaatctgcccgaagtcggcgatcccgaaaaacctaagctagtg
ttttttatcgatgaggcgcatttactctttgagggttgcccaccgagtttattaaaacgc
gtcgaacagatcatgcgcctaattcgctcaaaaggcataggcgtttatttttgctcgcaa
tttcctgatgatgtcccaaacgaaattctcgggcaattaggtaatcgtattcaacatgcc
ctgcgagcttacacgccaagggatcaaaaggccgttaaaaccgccgcagaaacctttgtg
cctaaccccaaactggttgttagcgacgtcatatcccagctcgctgtaggtgaagcctta
gtgtctatgttagccgacaaaggcgtgccaactatggtcgagcgcgcgctcatcgcaccg
ccacgttgccgcatgggacccgccacaagtgaggagttacaacaagtccgtgtccaaagc
ccgattggaggtaaatacgatcagttaatcaaccgcgaatcggcctacgaacgccttaac
caaagacgagttggtaacgccaccagcgacaccacatccacagcaagtgatgctcaaacg
ggccaaaaagccgaagaacaaggttggttcagtgaactcatttttggcaataagcgccgc
caagggttagctgaaaccttgtcaaaacaagcggcacgcacggttggcagccaattaggt
aaacaaattttgcgcggtatattaggtggcatgttaggtaaatcgagccgacgttag
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