Shewanella sp. WE21: CKQ84_05365
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Entry
CKQ84_05365 CDS
T05404
Name
(GenBank) pyruvate dehydrogenase complex transcriptional repressor PdhR
KO
K05799
GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
Organism
shew
Shewanella sp. WE21
Brite
KEGG Orthology (KO) [BR:
shew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shew03000
]
CKQ84_05365
Transcription factors [BR:
shew03000
]
Prokaryotic type
Helix-turn-helix
GntR family
CKQ84_05365
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GntR
FCD
MarR
TrmB
LON_substr_bdg
HTH_DeoR
HTH_41
HTH_11
Fe_dep_repress
MarR_2
Motif
Other DBs
NCBI-ProteinID:
AVI65358
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Position
complement(1259116..1259868)
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AA seq
250 aa
AA seq
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MAYSKINQPKISDVIMAQLEQMILEGSLQPGQKLPPERELAIQFEVSRPSLREAIQKLEA
KGLLMRRQGGGTYVKEQLWQTLADPIVELMNSDPESQYDLLEFRHATEGMMAYFAALRGT
DADMQNIKRMILEVEAATDIEQKAAAIVRFYRAVAEASHNVAMLHLVLSLTPVLHQNVAQ
NLELLSRREEASTMANDHRRALLAAIVRRDPDAAREASNEHLSYIEEVMLSVREEDSRLQ
RSLRRLKSGA
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atggcctatagtaaaattaatcagccaaaaatttctgatgtgatcatggcgcaattagag
caaatgatcttagaggggagtttacagcccggtcagaagttaccgcctgaacgcgaactg
gcgatccagtttgaagtgtctcgaccttctttgcgtgaagctattcaaaagcttgaggca
aaaggactgttaatgcgccgccaaggcggtggtacttatgtcaaagaacaactctggcag
acccttgccgatcctattgttgaactgatgaattcagatccagagagtcagtacgactta
ctggagttccgccatgccaccgaaggcatgatggcctattttgcggccctgcgtggtacc
gacgccgatatgcaaaatatcaagcgtatgatcctcgaggtggaagccgccaccgatatc
gaacaaaaagctgctgcgattgtgcgtttttatcgtgctgtggcggaagcgtcacataac
gtggctatgttacacctcgttcttagtttaacccctgtgctgcatcaaaatgtggcgcaa
aacctggagcttttaagccgccgcgaagaagcttctactatggctaacgatcacagacgg
gccttgctcgctgccatcgttcgtcgtgatcccgacgccgccagagaagcctcgaatgaa
cacttaagttacatcgaagaggtgatgttatctgtgcgggaagaagatagccggttgcag
cgaagcttgcgccgtttaaagagtggcgcttaa
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