Shewanella sp. WE21: CKQ84_05485
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Entry
CKQ84_05485 CDS
T05404
Symbol
frdB
Name
(GenBank) succinate dehydrogenase/fumarate reductase iron-sulfur subunit
KO
K25995
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
7.1.1.12
]
Organism
shew
Shewanella sp. WE21
Pathway
shew00020
Citrate cycle (TCA cycle)
shew00190
Oxidative phosphorylation
shew00620
Pyruvate metabolism
shew00650
Butanoate metabolism
shew00720
Other carbon fixation pathways
shew01100
Metabolic pathways
shew01110
Biosynthesis of secondary metabolites
shew01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
shew00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
CKQ84_05485 (frdB)
00620 Pyruvate metabolism
CKQ84_05485 (frdB)
00650 Butanoate metabolism
CKQ84_05485 (frdB)
09102 Energy metabolism
00190 Oxidative phosphorylation
CKQ84_05485 (frdB)
00720 Other carbon fixation pathways
CKQ84_05485 (frdB)
Enzymes [BR:
shew01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
CKQ84_05485 (frdB)
7. Translocases
7.1 Catalysing the translocation of protons
7.1.1 Linked to oxidoreductase reactions
7.1.1.12 succinate dehydrogenase (electrogenic, proton-motive force generating)
CKQ84_05485 (frdB)
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Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_8
Fer4_16
Fer4_9
Fer4_10
Fer4_2
Fer4_17
Fer4_7
Fer2
Fer4_4
Fer4_6
Fer4
Fer4_21
Motif
Other DBs
NCBI-ProteinID:
AVI65382
LinkDB
All DBs
Position
complement(1284927..1285661)
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AA seq
244 aa
AA seq
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MSQGRQLTFNIFRYDPQEPNDKPKMVRYQLTETPGMTVFIALNKLREEQDTSLQFDFVCR
AGICGSCAMVINGFPTLACRTLTAKYPKGEITLMPLPGFELIGDLSVNTGKFMRELAERL
KLWLHPKANDISVHRLEDPMDPDEAARLYELERCVECGVCVSACATKQMRETFVGAVGMM
KIARFEMDSRDARTAEDFYHVIGNQDGVFGCMTLLGCQDNCPKDLPHMQQIAYLRRKMAM
TLIR
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgagccaaggtcgccagttaacctttaatatctttcgttatgatccgcaggagccaaac
gataagccgaaaatggtgcgttatcagcttaccgaaacgccggggatgacggtatttatc
gcccttaataaactcagggaagaacaagacacttcattgcagttcgactttgtttgtcgt
gctggcatctgtggtagctgcgctatggtgatcaacggtttcccgacgctagcttgccgc
accttaacggccaaataccctaagggcgaaatcaccttaatgccgctgccaggttttgag
ttgattggtgatctctcggttaatactggtaagtttatgcgggaactggccgaacgctta
aagctgtggttacaccctaaggccaatgatataagcgtgcatcggcttgaagatcctatg
gatccagatgaagctgcgcgtttgtatgagctagagcgctgtgttgaatgtggcgtgtgt
gtttctgcctgtgcgactaaacaaatgcgtgaaacttttgtcggcgctgtgggcatgatg
aaaatagctcgttttgagatggacagccgtgacgctcgtactgccgaggatttttaccat
gtgattggcaatcaggatggcgtgtttggctgcatgactttactcggctgccaagacaac
tgtcctaaggatttgccacacatgcagcaaatcgcgtatttacgccgcaagatggccatg
actttgattcgataa
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