Shewanella sp. WE21: CKQ84_05605
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Entry
CKQ84_05605 CDS
T05404
Name
(GenBank) type I secretion system permease/ATPase
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
shew
Shewanella sp. WE21
Pathway
shew02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
shew00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CKQ84_05605
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shew02000
]
CKQ84_05605
02044 Secretion system [BR:
shew02044
]
CKQ84_05605
Transporters [BR:
shew02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
CKQ84_05605
Secretion system [BR:
shew02044
]
Type I secretion system
Adhesin protein transporter
CKQ84_05605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
SMC_N
Peptidase_C39
AAA_15
AAA_29
AAA_13
AAA_22
MMR_HSR1
AAA_23
DUF87
Motif
Other DBs
NCBI-ProteinID:
AVI65406
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All DBs
Position
1321303..1323480
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AA seq
725 aa
AA seq
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MSAAASEKIDQWTISASQRVLVDPLLDCLVLLTEHFGNPCSSDSLAAGLPLSGTVLSPDL
LPQAASRAGLAAKLSRKGLNEVSPILLPCILLLKDKKACILRELDVASDKAIIQLPETGG
EETLTIESLEALYVGYLFLVKQEYRGDMGFDVYLHDNKTHWLVQTLKDSAPIYRDALIAS
VLVNLFALVSPLFIMNVYDKVVPNLAFESLWVLAIGAAIAYMFDLIMRQLRSYLIDVAGK
KVDIIVSSRLFAKAIGIPLEKRSPSIGGMAKQLGEFDNIREILTSATITTLVDLPFAIFF
LIIIFIVAGDLAIVPVIGGIIIIGFTLYIQPKLKAAIEEGNKFSSLKHGHLIESLSALES
IKANGAEGIVQKSWQQMIGHSANWQLRSKKLSNSVSNVANFTVQFTVVCVVILGVYRVAD
NAISMGGIIAAVMLSSRAISPMAQLAGLMTRANHTASALRQLNEIMTQEDEFENKGHLVS
KQRLIGKINADHVGFSYPGSEKPVLHPMSLTINPGERIAIIGRNGSGKSTLAKLLVGLFQ
PTAGSLRYDGLDSAQIHPSDLRRNFGYLPQDVTLFHGSIRDNILFGTRQVTEHQLIRAVQ
LSGVSQFTNLEAEGLDQQVGEGGMSLSRGQRQTVALARATLNDPPVLLMDEPTASLDARA
EQQFIRSMQNVSKDRTLILITHKMHLLQLVDRIIVLERGHVVADGPKAEVLEKLNFGLVN
GEAKR
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
gtgtcagctgcagcttctgaaaaaattgatcaatggaccatttcagcctcacaaagagtg
ttagtggatcctttgctggattgtttagtgttactcactgagcattttggcaatccgtgc
tcgagcgattcgcttgcggcaggtttacccttgtcaggtaccgtgttatcacccgactta
ttgcctcaggcggcttcaagagcgggtctagcggcaaagctatctcgaaaaggcttaaac
gaagtatcacctatattgctcccctgtattttattattaaaagacaaaaaagcctgtata
ttgcgagaacttgatgttgcatcagataaagcaattattcaattacccgagacgggcggt
gaagaaacactgacaattgagtcgctcgaagccttatatgtgggatatttattcttagtc
aaacaagaataccgtggcgacatgggctttgatgtttatctacacgataataaaacccac
tggttagtccaaaccctcaaagattcagcacccatttatcgtgatgcattaatcgcttct
gtattggtgaatttattcgccttagtttcaccgttatttattatgaatgtgtatgacaaa
gtcgtcccaaacctcgcctttgaatccctttgggttttagcgattggtgcggcgattgcc
tatatgttcgatcttatcatgcggcaacttagaagttacctcatcgatgttgcaggaaaa
aaagtagatattattgtctcatcacgcttatttgctaaagcaattggtattccgctagaa
aaacgttctcctagtatcggcggcatggcgaaacagttaggtgaattcgataatattcgt
gaaattttaacttcggcaacgatcacaactttagtcgatctccccttcgcgatatttttc
ttaattattatttttattgtcgctggtgatctcgctatagttccagtcattggcggcata
atcattattggcttcacgctttatattcaacctaaactcaaagcggcaatcgaagaaggc
aataaattttcaagcttaaaacatgggcatttaatcgagagcttatcagcgctagagtca
attaaagctaatggtgctgaaggaattgtgcaaaaaagctggcaacagatgataggccac
agtgcaaactggcaattaaggtcaaaaaagctctccaactcagtatcgaacgtagcgaac
tttacggtgcaatttaccgttgtctgcgtggtgattttgggcgtttatcgtgtggctgat
aatgcgatatctatgggcggaattattgctgcggtcatgctatcgagccgcgccatttca
cctatggcacaacttgcaggcctgatgacgagagcaaaccacacagctagtgcactacgc
caactgaatgaaatcatgactcaagaagatgagtttgaaaataaaggacatttagttagt
aaacaaagactcataggcaagatcaatgctgatcatgtcggttttagttatcccggttct
gaaaagcctgtgttgcatccgatgtcgctgacgattaatcctggcgaacgcattgccatt
ataggtcgaaatggttcaggtaaaagtacgctcgctaagctactggttgggctatttcaa
cccacggcaggaagcttgcgctacgacggtttagactcagcacagattcatccaagtgat
ttacgccgtaattttggctacttaccccaagatgtcaccctattccatggttctattcgc
gacaatattttatttggtacacgtcaagtcactgaacatcaactcatccgcgcggtacag
ctttctggtgtgagtcaattcaccaacctagaagcagaaggcctagaccaacaggtcggc
gaaggtggcatgtcactcagtcgcggacaaagacaaaccgtcgctcttgctcgagccaca
ctgaatgatcccccagtgttactgatggatgagcctacggcgagtttagatgctcgcgct
gaacagcaatttattcgttcaatgcaaaatgtcagcaaagatagaacgttaattcttatt
acccacaagatgcatttattgcaactcgtcgaccgcattattgtacttgaacgcggccat
gtggttgccgatggacctaaagcagaagtgctagaaaaactcaattttggcctagtgaac
ggagaggctaagagatga
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