Shewanella sp. WE21: CKQ84_06040
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Entry
CKQ84_06040 CDS
T05404
Name
(GenBank) transcriptional regulator
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
shew
Shewanella sp. WE21
Brite
KEGG Orthology (KO) [BR:
shew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shew03000
]
CKQ84_06040
Transcription factors [BR:
shew03000
]
Prokaryotic type
Helix-turn-helix
LacI family
CKQ84_06040
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_1
Peripla_BP_3
LacI
Peripla_BP_4
HTH_3
HTH_10
HTH_26
HTH_23
HTH_24
HTH_IclR
HTH_7
HTH_Tnp_ISL3
DUF218
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
AVI65479
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Position
complement(1423517..1424515)
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AA seq
332 aa
AA seq
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MNKKRRPSLQDVADQVGVTKMTVSRYLKNPTRVAQSTQEKIAVALETLGYIPNRAPEILA
QATSRAIGVLVPSLTNQVFAEVLRGIENVTGKRGYQTMLAHYGYQAELEEERVASLLSYN
IDGLLLSESYHTPRTVRMIETAGIPVIEMMDSVSPSIQQCVGFDNTAAACEMVKAMIAQG
YRHIAYLGARMDIRTQLKMRGYELAMQQARLTPLAMTTNEASSFSLGASLLQQTLAKYPY
VDSFFCTNDDLAAGVIFECQRQGIKIPEQIGVAGFHGHDIGQSMTPKLASIITPRKEIGR
IAAIELLDRLNGKEIAESVIDLGYRIDLGETL
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaagcgtagacccagtcttcaagacgttgccgatcaagttggggtcaccaaa
atgacggtgagtcgctatttaaaaaatccaacaagggtggcgcaaagcactcaagagaag
attgctgtcgcactagaaaccttaggttatattcctaatcgcgcgccggaaattttagcg
caagcgaccagccgcgccattggcgtgttagtgccttcgttaaccaaccaagtatttgct
gaagtgctgcgcggtatcgagaatgtgaccggtaaacgcggttatcaaaccatgctggct
cactacgggtatcaggccgaattagaagaagagcgggtggcatcactgctctcttacaat
atcgatggcttactcttgtccgaaagttaccacacgccgcgtaccgtgcgaatgattgaa
acggcgggcattccggtcatcgaaatgatggatagcgtgtcgccttcgattcaacagtgt
gtgggtttcgataacacagcggccgcatgcgaaatggttaaggccatgattgcacaaggc
tatcgccacatagcctacctaggcgcgcgcatggatattcgcactcagcttaagatgcga
ggctacgagttagcgatgcagcaagctcggcttacacctttggcgatgaccacaaatgag
gcctcgtcgttttccttgggggcgtcgttattgcaacaaacattagcgaaatatccctat
gtggatagctttttttgcaccaacgatgatttggctgcgggggtgatatttgagtgtcaa
agacaaggcatcaagatccctgaacaaattggcgttgcagggtttcatggccatgatatt
ggccaatctatgacgccaaaattggcgagcattattacgccgagaaaagagattggtcga
attgctgccattgagctattagacaggctaaatggcaaagagatagcagaatcggttatc
gacctgggctatcgtattgatttaggggaaacactgtag
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