Shewanella sp. WE21: CKQ84_06380
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Entry
CKQ84_06380 CDS
T05404
Name
(GenBank) LysR family transcriptional regulator
Organism
shew
Shewanella sp. WE21
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Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_30
HTH_20
HTH_5
MarR_2
Motif
Other DBs
NCBI-ProteinID:
AVI65539
UniProt:
A0A2R3ES02
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Position
complement(1502248..1503186)
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AA seq
312 aa
AA seq
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MLKRLDLNLLPVLEILLEEQSVTAAAARLHLSQSAVSKQLTRLREVFDDPLFERTAYGLK
PTPKALSLAPELRQCLQQLAQFTRPDTFEPALSQRQFRMHLVETTYSLTFPHFMPMLLTQ
APGVSLNCQTWRLDTMDRLLRCDIDLAIGCREWDERSPMHVNNIPDDLCHVELVQDSPVC
LMRRDHPALTQEWNLDTFLSYRHLQVAFGGLEHWLLDDVLQLEGRKRDIAVNMTDFQSAL
TLCEQSDLILCAPSRYALAVMKSFELQSLPSPIKLIPGAYLLMWHKHFEHDLSHKWLREL
IISQVRDNNLSL
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgctaaaacgtttggatctgaatttactgcccgtactcgaaatcctacttgaggaacaa
agcgtgaccgctgcagctgcgcggttgcatttgagccagtcggcggtgagtaaacagctc
acacgtctgagggaagtatttgatgatcctttatttgagcgtaccgcctacggcctaaaa
ccgacacccaaggctttgtcactcgcgcctgagttgcgccaatgcttacagcaattggcg
caatttactcggccggacaccttcgaacccgccttgagccaacgacagtttagaatgcat
ttggtcgaaaccacctattcactgacctttcctcattttatgcccatgttgctcactcaa
gcgcccggtgtgagtctcaattgccaaacgtggcgactcgataccatggacagattactg
cgctgcgacatcgacttagccataggttgccgcgagtgggacgagcgctcgcccatgcat
gtgaataatattcccgatgacttatgccatgttgagttagtgcaggattctcctgtgtgt
ttgatgcgccgtgatcatccggcgttaacacaagaatggaatttagataccttcttgagt
tatcgccatctgcaagtggcctttggcggtttagagcattggttactggatgatgtgttg
caactcgagggccgtaaacgggatattgccgtgaatatgaccgactttcagagtgctctc
accctgtgtgaacagagcgatttgatcctctgtgcaccttcgcgctatgccttggctgtg
atgaagtcttttgagcttcagtctttaccatcacccatcaagctgatccccggtgcgtat
ttattgatgtggcacaaacacttcgaacacgacttgagccataaatggctgcgagagttg
attattagccaagtgcgagataataatttatcattataa
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