Shewanella sp. WE21: CKQ84_08585
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Entry
CKQ84_08585 CDS
T05404
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
shew
Shewanella sp. WE21
Pathway
shew00061
Fatty acid biosynthesis
shew00071
Fatty acid degradation
shew01100
Metabolic pathways
shew01212
Fatty acid metabolism
shew02024
Quorum sensing
shew04146
Peroxisome
Module
shew_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
shew00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
CKQ84_08585
00071 Fatty acid degradation
CKQ84_08585
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
CKQ84_08585
09145 Cellular community - prokaryotes
02024 Quorum sensing
CKQ84_08585
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
shew01004
]
CKQ84_08585
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
shew04147
]
CKQ84_08585
Enzymes [BR:
shew01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
CKQ84_08585
Lipid biosynthesis proteins [BR:
shew01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
CKQ84_08585
Exosome [BR:
shew04147
]
Exosomal proteins
Exosomal proteins of breast milk
CKQ84_08585
Exosomal proteins of breast cancer cells
CKQ84_08585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Cas9_C
Motif
Other DBs
NCBI-ProteinID:
AVI65922
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All DBs
Position
2023650..2025458
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AA seq
602 aa
AA seq
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MSLDQYHVIRLLQRQSESLKDAVALEGFEMAAPWYQVSWQAFDQISSKIAQVLIELGVQV
QDRCVILAQNCPQWTCADVGTLKTRAVVVPIYPTSTVEQASFIVNDATAKVIFVDDAKQY
AMACELQALCPSLEHVIVFDASVTLAADKANQHWHLDTLLAGDTQLNIEQEAELNQRLHA
ANLDDLLTLIYTSGTTGDPKGVMLDYRNMASTIRQHDQKLAFHSGDVSLAFLPLSHVFER
SWSFYVLCRGGHNVYLQNTQRVKEAISAVRPHTLCVVPRFLEKVYSAVQDKVAKSADGRK
KLFAWAMRVGQRQFEVGQGRAKGGLWLSLQWRLAHKLVYSKLQAVLGGRLKFMPCGGAAL
DVNVGSFFHAINIPVLCGYGMTETNATVTCNTLGNRVPGSNGQPLLETEIKLGKDDEILV
RGATVMRGYYNRPEDTAAAFEDGWLKTGDAGRFDANGNLFITDRIKELMKTSNGKYIAPQ
RVEGAVGCCPFIEQVAIIADARNYVTALIVPAFESLEAWAKDKGLKYESPLELLRHSHVV
EHFEQRLKQLQHELAGFEQIKKFTLLPEAFSMEAGLITPTLKLRRKMIYHKYAHEINAMY
NN
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgtctctcgatcaatatcatgttattcgactactacagcggcagagcgagtctttaaaa
gacgcagtagcgctggaaggttttgaaatggccgctccttggtatcaggtgagttggcaa
gccttcgaccaaatcagcagtaaaattgcacaagtgttgatcgaacttggcgtacaagtg
caagaccgttgcgttattctggcgcaaaactgcccgcagtggacttgtgccgatgtcggc
actctcaaaactcgcgccgttgtggtgccaatttatcccaccagtaccgtcgaacaggcg
agctttatcgtaaacgacgccaccgctaaagtgatttttgttgacgatgctaagcaatac
gccatggcgtgtgagttgcaagccttatgcccaagcctagagcatgtgattgtattcgat
gccagcgtgacacttgctgccgataaggccaatcagcattggcatctagataccctactg
gcgggtgacactcagttaaacattgagcaagaagccgagcttaatcagcgtttacacgct
gcaaatctcgatgatttactgaccttaatttatacctccggcacgacgggcgatcctaag
ggcgtgatgctggattaccgtaatatggcgtctaccatacgccagcacgatcaaaaactg
gccttccattctggcgatgtgtctttggcatttttgccattgagccatgtatttgagcgc
agttggagtttctacgtcttgtgccgtggcggccataacgtctatctgcaaaatacccaa
agagtgaaagaggcgattagcgccgtgcgtccacataccttgtgtgtggtgccgcgtttc
ctcgaaaaagtgtatagcgccgtacaagataaagtcgccaaatctgccgacggtcgtaag
aagttgtttgcttgggcgatgcgcgttggccaacgtcagttcgaagtcggccaaggtcgt
gctaagggcggattgtggttgtcgctgcaatggcgtttggcgcacaagctggtgtatagc
aagctgcaagccgtgcttggtggccgtttgaagtttatgccttgcggtggcgcagcctta
gatgtgaatgtcggtagtttcttccatgcgattaatattccagtactttgtgggtacggt
atgacagaaactaacgcgactgtgacctgcaataccttaggtaatcgagtgccgggttcc
aatggacaacctttgctggaaaccgaaattaagctaggtaaggacgatgagattttagtc
cgcggcgccactgtgatgcgcggctattacaatcgtcctgaagataccgccgctgcgttt
gaagatggttggttaaaaaccggtgatgcagggcgtttcgatgcgaacggcaatttattt
attaccgatcgtattaaagaattgatgaagacctccaacggtaaatatatcgcgccgcaa
agggttgagggcgccgtgggctgttgtccttttatcgagcaagtggcgattattgccgat
gcgcgtaactatgtgaccgctttgattgtgcctgcgtttgagtcactggaagcgtgggcg
aaggacaaagggctgaagtatgagtcacctttagaattgctgcgccatagtcatgtggtt
gagcattttgagcaacgcttaaagcagttacagcatgagttggccggttttgaacagatt
aaaaagttcactctgttgcctgaagcattttcgatggaagcgggtttaatcaccccaacg
ctcaagctgcgccgcaagatgatttaccataaatacgcccatgaaataaatgctatgtac
aacaattaa
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