Shewanella sp. WE21: CKQ84_09130
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Entry
CKQ84_09130 CDS
T05404
Name
(GenBank) HTH-type transcriptional repressor FabR
KO
K22105
TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator
Organism
shew
Shewanella sp. WE21
Brite
KEGG Orthology (KO) [BR:
shew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shew03000
]
CKQ84_09130
Transcription factors [BR:
shew03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
CKQ84_09130
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GFIT
Motif
Pfam:
TetR_N
TetR_C_46
TetR_C_32
Phage_lysozyme
HTH_29
HTH_24
HTH_7
Motif
Other DBs
NCBI-ProteinID:
AVI66022
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Position
2151157..2151771
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AA seq
204 aa
AA seq
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MGIRAQQKEKTRRALVDAAFNQLSAERSFSSLSLREVAREANIAPTSFYRHFKDMNELGL
TMVDEGGLTLRQMMRKGRQRAEVGGSVIRISVDTFMEVLDSNPNVFRILLHERSGTSAAF
RAAVAREIEHFISELAHYTEAKAGRTPLLARAQAEALVTLVFNAGASALDMKRADRKILA
DQLVMQLRMVAKGAEALQHKVEHR
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgggtattcgagcacagcaaaaagagaaaactcgcagagctttagtcgatgcggccttt
aatcagctaagtgctgagcgcagtttctcaagtctgagtttgcgagaggttgctcgggaa
gctaatatcgcgccgacatctttttatcgccattttaaagatatgaacgaacttggtctt
actatggtggatgagggcgggttaaccctaaggcagatgatgcgtaaaggccgtcagcga
gctgaagtgggtggcagtgtgatccgtatttccgttgatacctttatggaagtgcttgat
tcgaatccaaacgtattccgtattttattgcatgaacgctctggaacctcggcagcattt
cgtgcggcagttgcccgcgaaattgaacattttatttctgaattggctcattataccgaa
gccaaagcgggtcgaacccccttgctagcccgtgcacaggctgaagctttagtgactctg
gtgtttaatgctggcgcttccgcattagatatgaaacgggctgaccgtaaaattcttgcc
gatcaattagtcatgcaattgcgcatggtcgccaaaggcgccgaggctttgcagcataag
gttgaacaccgctaa
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