Shewanella sp. WE21: CKQ84_09820
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Entry
CKQ84_09820 CDS
T05404
Name
(GenBank) sodium:proton antiporter
KO
K18218
tetracycline resistance efflux pump
Organism
shew
Shewanella sp. WE21
Brite
KEGG Orthology (KO) [BR:
shew00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shew02000
]
CKQ84_09820
01504 Antimicrobial resistance genes [BR:
shew01504
]
CKQ84_09820
Transporters [BR:
shew02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
CKQ84_09820
Antimicrobial resistance genes [BR:
shew01504
]
Gene variants
Tetracycline resistance genes
Transporters
CKQ84_09820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Na_H_antiporter
Motif
Other DBs
NCBI-ProteinID:
AVI66141
LinkDB
All DBs
Position
complement(2277248..2278741)
Genome browser
AA seq
497 aa
AA seq
DB search
MSPSLLAILPLLLTLTLALFLRRTLVALGVGIVSGALLIAQFDPLQTGLYLLDIGVKQFY
AQGAWQAWHLNVLFAMLLLGSMTQLLARGGAVGQFGDWLYSRIRTERQARLGVVFLGWLV
FIDGIFSCLAVGHVCQPLSQRYGIRHEQLAYLVDSNASPLCALLPFSSWGPYVMALITGI
SFLPVSPLEAFIEVALFNFYAIVTLGLSVLVAWYGVGFHSFVAVTAVESSNTVEVKGNPW
LLAIPMLTLLSASVGLTLWSGAQQVSSWDVSLWLAKADIGASMRDACLLATLVTLAMLGL
SGRRLTALVGDLSHGVRMIAFAIAILLCTWMIGAVIQDLGVAKLLAAWAKAYLSPHLLVA
GMFLLCAIMAFATGSSWGTFAIMIPIGAEIAHNLDPHLLLPVLSAVMAGSVFGDHCSPIS
DTSVLSATSSGCAPHDHVVTQLPFALIAACAALVGFQLVNLAVATPLVWLAVVSCSLGLF
ALMARFYSPLPRFVAQT
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcctagtttgctcgccatactcccgctactgttgaccttaaccttagccctattt
ttacgccgcacactggtggcgttaggtgtaggtattgtctctggtgccctattaatcgcc
caatttgatcctctgcaaactgggttgtatttgcttgatataggtgtaaaacaattttat
gcccaaggtgcttggcaagcgtggcatctcaatgtgctgttcgccatgttactcctcggt
agcatgacgcaattgttagcacgtggtggtgccgtgggtcagtttggtgattggctatat
agccgtattcgtactgaacgtcaggcgcgtcttggggtcgtatttcttggttggttagtg
tttatcgatgggattttcagttgtcttgctgtcggccatgtgtgtcagccgctcagccag
cgttatggtattcgccatgagcagctcgcctatttagttgattccaatgcttcgccttta
tgcgcgctattgcctttctccagttggggcccctatgtgatggcgcttatcacggggatc
agctttttgcccgtgtcgccgctggaagcctttattgaggtggccttatttaacttttac
gccatcgtgaccttaggcttgtccgtactcgtcgcttggtatggcgtaggttttcactct
tttgttgctgttactgctgtggaatcctccaatacggtcgaggttaagggaaatccttgg
ctgctcgcaatccctatgctgactctgctgtctgcttcagtgggattaactttgtggtct
ggggctcagcaggtctcttcttgggatgtgtcactctggcttgctaaggctgatattggc
gcttctatgcgcgatgcttgtttgttggcaaccttagtcactcttgccatgttaggcttg
tctgggcgacgtttaacggcattagtgggggatttgagccacggagttcgcatgatcgcc
ttcgccattgcgattttactctgcacttggatgattggcgctgtgatccaagatcttggc
gtcgctaaattgttggctgcttgggctaaggcttatctttctccgcacctgctggtagcg
ggaatgtttttactctgcgcgataatggcttttgcgacgggttcaagctggggaacattt
gcaattatgatccctattggcgcagagattgcccataacttagatcctcatttgttgtta
cctgtactgagcgctgtgatggctgggtcggtttttggcgaccactgctcgcccatttca
gataccagcgtgctcagtgcgaccagctcaggttgcgctccccatgaccatgtggtgact
cagttgccctttgctttgatcgcggcatgtgcagccttagtcggatttcaattagtcaat
ttagccgtggcgacgccgttagtgtggctggccgtggtgagctgtagcctaggattattt
gccttgatggcacgtttttattcacctttgcccagattcgtggcgcagacataa
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