Shewanella sp. WE21: CKQ84_09985
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Entry
CKQ84_09985 CDS
T05404
Name
(GenBank) XRE family transcriptional regulator
KO
K23779
XRE family transcriptional regulator, regulator of sulfur utilization
Organism
shew
Shewanella sp. WE21
Brite
KEGG Orthology (KO) [BR:
shew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shew03000
]
CKQ84_09985
Transcription factors [BR:
shew03000
]
Prokaryotic type
Helix-turn-helix
XRE family
CKQ84_09985
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_3
Cupin_2
HTH_31
HTH_25
HTH_19
HTH_26
MannoseP_isomer
Cupin_3
AraC_binding
HTH_37
Ppnp
Motif
Other DBs
NCBI-ProteinID:
AVI66173
LinkDB
All DBs
Position
complement(2309659..2310234)
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AA seq
191 aa
AA seq
DB search
MQTINSYLASTLKALRNQKGWSLDKAAQETGVSKAMIGQIERGESSPTIATLWKIASGFN
ISLSTFLEPTPQSQGAVFRKPDELRQQPATDGMLVASLFPFEERFGFEMFELTLLPNYER
LSEPHETGVTEHVIVLSGTMEVLVDGEWQTLKQGEAVRFAADKPHGYRNLNEQAVVFHDI
IHYQRANVSSL
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
gtgcaaacgataaacagctatctcgccagcacgcttaaagcacttcgcaaccaaaaggga
tggagtttagataaagccgcccaagagacgggcgttagtaaggccatgataggacaaatc
gagcgcggtgaatcaagcccaaccattgcgacgctgtggaaaattgccagtggattcaat
atctcgctgtcgacctttctcgaacccacaccccagagccaaggcgcagtattccgtaag
cccgacgagttacgccaacaacccgccaccgacggcatgctagtcgcctcactcttcccc
tttgaagagcgcttcggttttgagatgtttgaactcaccctgctgccaaactatgagcgc
ctttctgagccccatgaaacgggtgtcactgagcatgtcattgtcttgagcggtactatg
gaagtgctagtcgatggcgagtggcaaacactcaagcaaggtgaagcggtacgatttgcg
gccgacaaaccccatggctatcgcaatctaaacgagcaagccgtggtattccacgacatc
attcactatcaaagagctaatgtgtctagcctctaa
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