Shewanella sp. WE21: CKQ84_10620
Help
Entry
CKQ84_10620 CDS
T05404
Name
(GenBank) cryptochrome/photolyase family protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
shew
Shewanella sp. WE21
Brite
KEGG Orthology (KO) [BR:
shew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shew03400
]
CKQ84_10620
Enzymes [BR:
shew01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
CKQ84_10620
DNA repair and recombination proteins [BR:
shew03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
CKQ84_10620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
AVI66287
LinkDB
All DBs
Position
complement(2446726..2448291)
Genome browser
AA seq
521 aa
AA seq
DB search
MQLQQFHTVRLILGDQLNAQHSWFNRVDDQVLYVIAELHQENTYVTHHVQKICAFFAAMA
QFAQELRAQGHQVLYLNLDDTHDDTQGFSDLLTLIQHQVTLVGAIKFEYQRPDEYRLLEQ
LSQLKLNTAVVNCVDTEHFILPFDEIDAQFPVGKHIMMEHFYRRMRKRYNILMHDGKPLG
GQWNFDTSNRQKLKTQDIKVLPEPLMFSLDVTEIRARLERHQIPTMGRINAPLLWPINRA
QSLELLTYFCQVCLPSFGRFQDAMTAQHPAKWSLYHSRLSFSLNSKLISPLEVINAAIDS
YQTNTEIDIAQVEGFVRQILGWREYVRGIYWANMPQYASTNALDAHGTLPDYFWHGDTKM
SCMRQALSQSLDFAYAHHIQRLMVIGNFCLLTEIEPNQIGEWYLGVYVDAIEWVEMPNTR
GMALFADGGIVGTKPYAASGSYINKMSDYCSGCHYKIKERSGTLACPFNSFYWRFMDKHR
ARLSQNPRIGMLYNTWDKMDEPVRHAILATAEHNLVHLNRL
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgcaattacagcaattccatacagtcaggttaattttaggcgatcaactcaatgcccag
cattcttggtttaaccgcgttgatgatcaagtgctgtatgtgattgcagaactgcaccaa
gaaaacacttatgtgacccatcatgtgcaaaaaatatgtgccttctttgcggcaatggca
caatttgcccaagagctgcgcgcgcaagggcatcaagtgctctatttgaatctggatgac
actcatgatgacacccaaggctttagcgatctactgacgctaattcaacatcaggtaaca
ctggttggcgcgatcaagtttgaataccaaaggccagatgaataccgcctacttgagcaa
ttgagtcagcttaagctcaacaccgccgtggtgaactgtgtcgatacagaacactttatc
ttaccctttgacgaaatcgatgcgcagttccccgtcggcaaacacattatgatggagcac
ttttatcgccgcatgcgtaaacgttacaacatcttgatgcatgacgggaaaccactcggc
gggcagtggaactttgataccagcaaccgtcagaagcttaaaactcaggatataaaggtc
ttgcctgagccattaatgtttagcctcgatgtgactgaaattcgcgctaggcttgagcgt
caccaaatcccgaccatgggtcgcattaatgcgccattactctggccgataaaccgtgcg
caaagcctcgaattattaacatatttttgtcaggtttgcttgccttcctttggccgtttt
caagatgccatgacagcgcaacatcccgccaagtggagcttgtaccatagtcgactatca
ttcagccttaacagtaaattaatcagcccgttagaagtcatcaatgcggccatcgacagt
tatcaaacgaatactgagattgatatcgcccaagtcgaaggatttgtgcggcagatatta
ggttggcgagaatacgttcgcggcatttactgggcgaatatgccacagtacgccagtact
aacgcgctcgatgcccatggaacactgcccgattatttttggcatggcgacactaagatg
agctgcatgcgacaagccttatctcaatcattagattttgcctacgcccatcatattcag
cgcttaatggtgatcggcaatttctgcttattaaccgaaatcgagccaaatcaaatcggt
gagtggtatttaggcgtgtatgttgacgccatcgaatgggttgaaatgcccaacacccgc
ggcatggcattgtttgccgacggcggcattgtcggcactaaaccctacgccgccagcggc
tcttacatcaataaaatgagtgattattgcagcgggtgtcattacaagataaaagagcgc
agcggcacactcgcctgcccgttcaatagcttttattggcgctttatggacaaacaccgc
gcgcgattatcgcaaaatccaaggatcggcatgctgtacaacacatgggacaagatggac
gagcccgtaaggcatgccatattagccacagccgagcacaacctcgttcacctaaaccgt
ttgtag
DBGET
integrated database retrieval system
