Shewanella sp. WE21: CKQ84_10810
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Entry
CKQ84_10810 CDS
T05404
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
shew
Shewanella sp. WE21
Pathway
shew03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shew00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CKQ84_10810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shew03400
]
CKQ84_10810
Enzymes [BR:
shew01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CKQ84_10810
DNA repair and recombination proteins [BR:
shew03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CKQ84_10810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Helicase_C
WHD_PriA
Zn_ribbon_PriA
AAA_30
TrwB_AAD_bind
DUF2321
Motif
Other DBs
NCBI-ProteinID:
AVI66323
LinkDB
All DBs
Position
complement(2485245..2487440)
Genome browser
AA seq
731 aa
AA seq
DB search
MSLFVEVALPVPMRQTFSYRVPESYPSTPQIGVRVKVPFGRQQLIGLVTGITESCSLAPK
QIKSVLEFIDDKPLLPESLYKLTLWAARYYFCSQGQMLTQALPVALRKGLDAAPQKIQFW
QLTEIGQNIAPEVVKRAPAQKKLLELLKTASLTQEEVISLDISKAALKALEDKGWVARHE
KIAELNLDWRTTLEMDETPHKLNKEQAVAVATLNLQQGYHCTLLEGITGSGKTEVYLAVL
EEILKQGKQALILVPEIGLTPQTINRFKRRFKVNVAILHSGLTDNQRLEAWRQARCGQAA
IIIGTRSALFTPMAYPGIIILDEEHDSSFKQQEGVGYHARDLAVMRGHLEAIPVILGTAT
PSLESLQNALSGRYHHLQLGERAGAAKKVRQGIIDIKNMPLKAGMSVPLLNEIRLHLDAG
NQVLLFLNRRGFAPALLCHECGHLHECDRCDAFFTVHQSLGEICCHHCGNQYAIPKQCHK
CGSTMLMGQGIGTEQLAEALQQEFPKHPVVRIDRDTTRLKGSLETHLNAIHKGEYKILVG
TQMLAKGHHFPDVTLVGLLDVDGALFSADFRAPERFGQLYTQVAGRAGRASKPGTVLLQT
HQSDNPILRDLLHRGYGEFARSQLKERQQALLPPAWHMVLVRAEAHLASDADNFLNAFAA
LLPQDKEFEVIGPMPAPLDKKAGKFRRQLLFQAKNRNRLQQEFERIHPLVEQLIEAKRCR
WSLDRDPQDLL
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgtcattgtttgtcgaagttgcgttacctgtgcctatgcggcaaacctttagctaccgc
gtacccgaatcctatcctagtacaccgcaaataggtgtgcgcgttaaagttcccttcggt
cgtcaacaattgatcgggttagtcacaggtatcactgagtcttgcagcttagccccaaag
caaattaagtctgtgctcgagtttatcgacgataaacctttactgcctgaatcactttat
aaattaactctttgggctgcgagatactatttttgcagccaagggcagatgctaacccaa
gccttacctgtggctctgcgtaaagggctcgatgccgcgccacaaaaaatccaattctgg
caattaactgaaataggccaaaatattgcgcccgaagtggttaaacgcgcacccgcacag
aaaaaactactcgagttactcaaaaccgccagcttaacccaagaagaggttatcagctta
gacatcagtaaagcggcgcttaaagccctagaagataaaggctgggtggcacgccatgaa
aaaattgccgagcttaacctcgactggcgcaccacactcgaaatggacgaaacgccacat
aaactcaataaagaacaagccgtcgctgttgccactttaaatctgcaacaaggatatcac
tgtactttattagaaggcattaccggttcgggtaaaacggaagtctatcttgctgtactc
gaagaaatcctcaagcaaggcaaacaagcgttaattttagtgcctgaaatcggcttaaca
ccccagacaatcaatcgctttaagcgccgtttcaaagtcaatgttgccattttgcattca
gggttaaccgacaatcagagactcgaagcatggcgccaagcccgctgtggtcaggcggca
atcattattggcacgcgttcagccttgttcacacctatggcgtatcccggcatcatcata
ctcgatgaagaacacgacagtagcttcaaacaacaggaaggcgttggttatcatgcccgc
gacttggcagtcatgcgtggccatttagaagcgattccggtgattttgggcacagcaacg
ccctcactcgaaagtctacaaaatgccttaagcggccgttaccatcatttacaattgggt
gaacgcgcaggtgcggctaaaaaagtgcgccaaggcattatcgatattaaaaatatgccg
ctgaaagccggtatgtcagtgccgttactgaacgaaatccgcttgcatttagacgcaggc
aaccaagtcttgttgtttctcaatcgccgcggcttcgcaccagccctgctttgccacgag
tgtgggcacttacacgaatgcgaccgctgcgacgcgtttttcacagtacatcaatccctt
ggcgaaatttgctgtcaccattgtggcaatcaatacgctatccccaagcagtgtcacaaa
tgtggcagcactatgttgatgggccaaggcataggcacagaacagctcgccgaagcgctg
caacaagagtttcctaaacatccagtagtgcgcatcgaccgtgatacgacccgccttaaa
ggttcattagaaacccacttaaatgcgattcataagggggaatataaaatcctcgtcggc
acgcaaatgctagctaagggccaccacttccctgatgtgacgcttgttgggttactcgat
gtcgatggcgctttatttagcgccgacttccgcgcgcccgaacgttttggacaactctat
acccaagttgcaggtcgcgcagggcgcgccagtaaacccggcacggtattattgcaaact
catcagagcgacaatcccattttgcgggatttgctgcaccgcggttatggcgagtttgct
cgcagccagctcaaagaacgtcaacaggcactgctgccgccagcatggcatatggtattg
gtgcgcgccgaagcgcatttagccagtgatgccgataactttctcaacgccttcgccgcg
ctcttgccccaagataaagaatttgaggtgattggccctatgcccgcgcccttagataaa
aaagctggcaagttccgtcgccaactcttattccaagctaaaaaccgcaaccgtctgcag
caagagtttgaacgtattcatccgcttgtagaacaacttatcgaagctaaacgctgccga
tggagcttagacagagatccgcaggatctcctctga
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