Shewanella sp. WE21: CKQ84_11130
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Entry
CKQ84_11130 CDS
T05404
Name
(GenBank) transcriptional regulator SlyA
KO
K06075
MarR family transcriptional regulator, transcriptional regulator for hemolysin
Organism
shew
Shewanella sp. WE21
Brite
KEGG Orthology (KO) [BR:
shew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shew03000
]
CKQ84_11130
Transcription factors [BR:
shew03000
]
Prokaryotic type
Helix-turn-helix
MarR family
CKQ84_11130
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MarR_2
MarR
HTH_27
HVO_A0261_N
HTH_Crp_2
HTH_20
HTH_34
GntR
Fe_dep_repress
FUR
HTH_24
HxlR
TrmB
HTH_IclR
PadR
WHD_ArnR1
Replic_Relax
DUF2250
Motif
Other DBs
NCBI-ProteinID:
AVI66385
LinkDB
All DBs
Position
2564181..2564654
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AA seq
157 aa
AA seq
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MQKELERLKELSLAEHLGRLHRLWRTVADVELAPLGLTHPRWTALWKLLRLGDSVSQKVL
ADALEIELASLMRTLGQLEEQGLVERHCCDKDKRARIVSLTPAGLDVLKQMEARIIQVRR
ELLGGISAEELSEFERIISLISDNASAKLTKVTDTLL
NT seq
474 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaagaattagagcgactaaaagagttatcactggcggagcatttaggccgtctg
catcgactgtggcgtaccgtggccgatgttgagctggcacctttaggattaactcatccc
cgttggacagcattgtggaaattactgcgtttaggcgacagcgtgagccaaaaagtgttg
gccgatgccttggaaattgaattggcttcgctaatgcgcaccttagggcaattagaagag
caaggtctagtcgagcgtcattgttgtgacaaagataagcgggcaaggattgtgagcctg
acgccagcgggattagatgttttaaagcaaatggaagcgcggattattcaagtgcgccgt
gagttattaggcgggatcagtgccgaagagttgagcgaatttgaacgcattattagcctg
atcagcgacaacgcaagcgccaaattaaccaaggttacagacacccttttgtga
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