Shewanella sp. WE21: CKQ84_11215
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Entry
CKQ84_11215 CDS
T05404
Name
(GenBank) single-stranded DNA-binding protein
KO
K03111
single-strand DNA-binding protein
Organism
shew
Shewanella sp. WE21
Pathway
shew03030
DNA replication
shew03430
Mismatch repair
shew03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shew00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CKQ84_11215
03430 Mismatch repair
CKQ84_11215
03440 Homologous recombination
CKQ84_11215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shew03032
]
CKQ84_11215
03400 DNA repair and recombination proteins [BR:
shew03400
]
CKQ84_11215
03029 Mitochondrial biogenesis [BR:
shew03029
]
CKQ84_11215
DNA replication proteins [BR:
shew03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CKQ84_11215
DNA repair and recombination proteins [BR:
shew03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
CKQ84_11215
TLS (translesion DNA synthesis) factors
Other SOS response factors
CKQ84_11215
Mitochondrial biogenesis [BR:
shew03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
CKQ84_11215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSB
SSB_1
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AVI66400
LinkDB
All DBs
Position
2584112..2584822
Genome browser
AA seq
236 aa
AA seq
DB search
MASRGVNKVILVGNLGQDPEVRYMPNGNAVANITVATSESWKDQQGQQQERTEWHRVVLF
GKLAEITGEYLRKGSQVYLEGKLQTRKWKDQSGQDRYSTEVVIDQSGSMQMLGSRGQGGQ
AQGAPMGGGMPQNAGYQSAPQQAAPAQNQYAPAPQAAPAYQAPAQQQYAPPAPAQQQGYG
QPQAQQPQQGGYAPKPQAAPAPAYQAPAAPAQRPAPQPQQNFTPDLDDGWDDDIPF
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atggccagtcgtggtgttaacaaggtaattttggttggcaatttgggacaagatccagaa
gtgcgttatatgccaaacggtaatgcagtcgcaaacatcacagtagcgactagcgaatcg
tggaaagaccaacagggtcaacagcaagagcgtactgaatggcaccgtgtggttctgttc
ggcaaattagctgaaattacaggtgaatacctgcgtaaaggttcacaggtttaccttgaa
ggtaaactgcaaactcgtaagtggaaagaccaaagtggtcaagaccgttacagcactgaa
gtggttatcgaccaaagcggtagcatgcaaatgctaggtagccgtggtcaaggtgggcaa
gcacaaggcgcgccaatgggcggcggcatgccacaaaacgcaggttatcaatctgcacca
cagcaagccgcgcctgcgcaaaatcaatatgcgccagcgcctcaagcagcacctgcttac
caagcgccagctcagcaacaatatgctccgccagcacctgcccagcagcaaggttatggt
cagccacaggctcaacaaccacaacaaggtggttatgcgcctaagccacaagccgctcca
gcaccagcttatcaagcgcctgcagcaccggcacagcgtccagcgccacaaccacagcaa
aacttcactccagatttggatgatggctgggatgacgatattccgttctag
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