Shewanella sp. WE21: CKQ84_11230
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Entry
CKQ84_11230 CDS
T05404
Name
(GenBank) fumarate reductase flavoprotein subunit
KO
K00233
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
7.1.1.12
]
Organism
shew
Shewanella sp. WE21
Pathway
shew00020
Citrate cycle (TCA cycle)
shew00190
Oxidative phosphorylation
shew00620
Pyruvate metabolism
shew00650
Butanoate metabolism
shew00720
Other carbon fixation pathways
shew01100
Metabolic pathways
shew01110
Biosynthesis of secondary metabolites
shew01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
shew00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
CKQ84_11230
00620 Pyruvate metabolism
CKQ84_11230
00650 Butanoate metabolism
CKQ84_11230
09102 Energy metabolism
00190 Oxidative phosphorylation
CKQ84_11230
00720 Other carbon fixation pathways
CKQ84_11230
Enzymes [BR:
shew01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
CKQ84_11230
7. Translocases
7.1 Catalysing the translocation of protons
7.1.1 Linked to oxidoreductase reactions
7.1.1.12 succinate dehydrogenase (electrogenic, proton-motive force generating)
CKQ84_11230
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
DAO
GIDA
Pyr_redox_2
NAD_binding_8
Pyr_redox_3
Motif
Other DBs
NCBI-ProteinID:
AVI66403
LinkDB
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Position
complement(2587017..2589026)
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AA seq
669 aa
AA seq
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MKIIYTDSLVIGAGLAGLRVAIATKERGLDTLVLSLIPAKRSHSAAAQGGMQASLGNTVK
GMGDNEDIHFQDTVKGSDWGCDQDVARMFAHVAPKAIRELTNWGVPWSRISAGPREVIMN
AQRVTLNEAEEAHGLINARDFGGTKKWRTCYTADGTGHSLLYAVDNQAISMGIPVHERIE
ALSLIHDGKRCHGVIARCLVTGELRAYVAKSTTIATGGYGKIYEISTNATICEGIGQALA
LDTGVATLGNMEAVQFHPTAIVPAGILTTEGCRGDGGILRDKDGHRFMPDYEPEKKELAS
RDVVSRRMTEHMRKGNGVESPYGPHLWLDITQLGREHIETNLREVKEICDYFLGIDPCKD
WIPVRPTQHYSMGGVRTNATGESPQLKGLFSVGEAACWDMHGFNRLGGNSVAETVVGGMI
IGKYVADFCQNNDLEIDTALTQKFIDKLQQEIDGLVEGNGTENPFQIKKEMQRIMMNYVG
IFRNGPELDKAIKGLKDLLLRAKNLGLKCKKRHSNPELVEALRVTRMLKVALTVACGAEA
RTESRGAHSREDYPQRNDKDWLNRTLATWPDAESLEPVLRYEALDVMKMELPPGYRGYGN
DNTIAHPDTEKRVQEINQVLASLGDDPDRDTLQRALMPYELPSHLQAPNERLSDTLAITP
AQPVGNKPL
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaatcatttatacagactcattagtcattggtgcaggattggcaggccttagagtc
gcgattgccaccaaagagcgaggcctagataccttagtgctatcgttaattcccgcaaaa
cgttcacattcggccgccgcacagggcggaatgcaagccagcctaggcaatactgttaaa
ggcatgggtgataacgaagacattcactttcaagacacagtcaaaggttctgactggggc
tgcgatcaagacgtcgcacgcatgtttgcccacgttgcacctaaagcgatccgagaactc
accaactggggcgtgccttggtcaaggatttccgccggcccgcgcgaagtcatcatgaac
gcgcaaagggtaacgctcaatgaggctgaagaagctcacggcctgatcaatgcccgcgat
tttggtggcactaaaaaatggcgtacctgttacaccgccgatggcactggccactctttg
ctgtatgcggtcgataaccaagctatctccatgggcattccagtacacgaacggattgaa
gcactgtcgctgatccatgacggtaagcgttgccatggtgtcattgcccgctgtttagtc
acaggtgaattgcgcgcttatgtcgccaaatccaccaccatcgccaccggcggttatggc
aagatttatgaaatatcgaccaatgccaccatctgcgaaggcataggccaagcgttagca
ctcgacacaggtgtcgccaccttaggcaatatggaagcggtgcagtttcaccccaccgcc
atagtgcccgcggggatcctcaccactgaaggatgtcgtggtgatggcggtattctgcgt
gataaagacggtcatcgctttatgccagattacgagccagagaaaaaagaactcgcttcc
cgcgatgtggtttcccgccgcatgacagagcacatgcgtaaaggcaatggagtcgaaagc
ccttacggcccgcatctgtggctggatattacgcagctgggccgtgagcatatcgaaacc
aacctgcgcgaagtgaaagagatttgtgattatttcctcggtatcgatccgtgcaaagat
tggatccccgtcaggccaacccagcattactccatgggcggtgtgcgcaccaatgccaca
ggtgagagtccacaactcaaagggctgttcagcgtcggagaagcggcctgttgggacatg
catggctttaaccgtttaggcggtaattcggtggcagaaactgtggtcggcggcatgatc
atcggcaaatatgtcgctgatttttgtcagaataacgacttagaaattgataccgcgctg
actcaaaaattcatcgataaattacagcaagaaatcgatggactggtcgaaggcaacggt
acagaaaaccccttccaaataaagaaagaaatgcaacgcatcatgatgaactacgtcggg
atcttccgtaatggacccgagttagataaagccatcaaaggcttgaaagacttgctgctg
cgggcaaaaaatcttggccttaaatgtaaaaaacgtcactccaatcctgagttagtcgaa
gcgctgcgcgtcacccgtatgttaaaagtagccctaaccgtcgcctgtggtgcagaggct
cgcactgaaagtcgcggcgcccattcacgggaagattacccacaacgcaacgataaagat
tggctcaaccgcacgctggcgacttggccagatgccgaatcacttgaaccagtactgcgt
tatgaagcgttagatgtgatgaaaatggagctaccaccgggatatcgaggctacggtaac
gacaatactatcgcccatcctgataccgaaaaacgcgtacaagaaatcaatcaagtgctc
gcgagcttaggtgatgaccccgatagagacacactgcagcgagccctgatgccatacgag
ctgccaagccacctgcaggctcctaatgaacgcctcagcgataccttagcgatcactcca
gcccaaccggtaggaaacaaaccactatga
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