Shewanella sp. WE21: CKQ84_11595
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Entry
CKQ84_11595 CDS
T05404
Name
(GenBank) D-arabinose 5-phosphate isomerase
KO
K06041
arabinose-5-phosphate isomerase [EC:
5.3.1.13
]
Organism
shew
Shewanella sp. WE21
Pathway
shew00541
Biosynthesis of various nucleotide sugars
shew01100
Metabolic pathways
shew01250
Biosynthesis of nucleotide sugars
Module
shew_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
shew00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
CKQ84_11595
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
shew01005
]
CKQ84_11595
Enzymes [BR:
shew01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.1 Interconverting aldoses and ketoses, and related compounds
5.3.1.13 arabinose-5-phosphate isomerase
CKQ84_11595
Lipopolysaccharide biosynthesis proteins [BR:
shew01005
]
Lipid A
CKQ84_11595
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SIS
CBS
SIS_2
Motif
Other DBs
NCBI-ProteinID:
AVI66470
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All DBs
Position
complement(2676062..2677039)
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AA seq
325 aa
AA seq
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MVDKSQLRQWGCKVIDIEKSALDNLYQYVDSAEFAEACELILNCTGKVIVMGMGKSGHIG
NKISATLASTGTPAFFVHPGEASHGDLGVLADNDVILAISNSGESSEILTLMPVIQRMGV
PVIAVTGKPESNMARLSKVHLCIEVPEEACPLGLAPTSSTTATLVMGDAIAIALLQAKGF
TRDDFAMSHPGGALGRKLLLKVSDVMHSGDDLPLVNHDICITEALYEISKKGLGMTAIID
DQRKLVGIFTDGDLRRVIDAEVNLRTTPIADVMTRNCVTITDNVLAAQALQVMDSKNING
LIVIDKDRHPIGALNMLDMVKAGVI
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggtagacaaatcacaactgcgccaatggggttgtaaagttatcgacattgaaaagtca
gccctagacaatctttatcaatatgttgattcggctgaatttgcagaagcttgcgagttg
atcctcaactgcacaggcaaagtgattgtcatgggaatgggcaaatcgggccatatcggc
aataagatttctgccaccctcgccagcacaggaacgcccgcattttttgtgcatccgggt
gaagccagccacggcgatctgggtgtattagccgataacgatgtgattttagcgatttca
aattccggtgagtcgagcgaaatcctcaccttaatgccggtcatccaacgtatgggcgtg
cccgttatcgcggtaacaggtaaacccgaatcgaatatggcgcgattatctaaagtgcat
ttatgtatcgaagtcccagaagaggcttgcccacttggacttgccccaacgtcgagcact
accgcgaccttagtgatgggcgatgccatcgccattgcgctactacaagctaaaggcttt
acccgtgatgattttgctatgtcccatcccggcggtgctttaggacgtaagttgctgtta
aaagtcagtgatgtgatgcacagcggtgatgacttaccgctcgtcaaccacgatatttgc
atcacagaagctctgtacgaaatctccaagaaaggcttaggcatgacggcgattatcgat
gatcagcgcaagctggttggtatcttcaccgatggtgatttacgccgcgttatcgatgcc
gaagtgaatttacgcacgacgcccattgccgatgtgatgacccgtaactgcgtcacgatc
acggataatgtattggccgcccaagcgctgcaagtgatggactcaaaaaacatcaacgga
ttaattgttatcgataaagatcgccatcctatcggcgctcttaacatgctagacatggtt
aaagcaggagtcatttaa
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