Shewanella sp. WE21: CKQ84_12315
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Entry
CKQ84_12315 CDS
T05404
Name
(GenBank) tRNA-modifying protein YgfZ
KO
K06980
tRNA-modifying protein YgfZ
Organism
shew
Shewanella sp. WE21
Brite
KEGG Orthology (KO) [BR:
shew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shew03016
]
CKQ84_12315
Transfer RNA biogenesis [BR:
shew03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
CKQ84_12315
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YgfZ_barrel
GCV_T
Motif
Other DBs
NCBI-ProteinID:
AVI66606
LinkDB
All DBs
Position
complement(2830635..2831597)
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AA seq
320 aa
AA seq
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MTISVSTPHWDLDATLPPLMLANLSHLGLIKVVGEQGRSFIHGQVTTDISSLATDQWRWG
AHCDPKGKMLASFRTFAIQDALFMLMPKDAIEVDLPQLQKYAVFSKATLSNASAEWTLLG
VAGEQASQFVNKHFGDIQQELTLIENGAILKDAERFILVLTPDAAAALVAQSELSVFDAS
AWQALEIAAGYPNLAASHASQYVPQMCNLQAVNGISFNKGCYMGQETIARMKYRGGNKRA
LYILRGHTSLQITLASGLEIAMEDSFRRGGQIIEFVQRGNQVLLTAVLPNDTPNDTQLRF
ADDEQSHLTIQALPYSLDEA
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgactatttcagtttctacgccccattgggatctggacgctaccttgcctccacttatg
cttgccaacttatctcatttgggcctcatcaaagtcgttggagaacaaggccgcagtttt
atccatggccaagtgaccacagacatcagctcattggccacggatcaatggcgctggggc
gcccattgcgatcctaaaggtaaaatgctggccagtttcagaacctttgccattcaagat
gcactctttatgttgatgccaaaggatgccatcgaagtcgatttaccccagttacaaaaa
tatgccgtgtttagtaaagccaccttaagcaatgcatccgctgagtggactctgctcggg
gttgccggtgaacaggcaagccaattcgtgaacaaacattttggtgacattcagcaagag
ctcacactcattgaaaatggtgcgattttaaaagacgctgaacgttttattttagtatta
acaccagatgccgcagcagctttagttgcgcaatcggaactgagtgtatttgacgccagt
gcatggcaagcgttagagattgcagcaggttaccccaaccttgccgccagccatgccagt
cagtacgtaccgcagatgtgtaatctacaagcggttaacggtatcagcttcaataagggc
tgttacatgggacaagaaaccatagcgcgcatgaaatatcgcggtggtaataaacgcgcc
ctgtatattttgcgcggtcacactagtcttcaaatcaccctagcatcaggcctcgaaatc
gcgatggaagacagttttcgccgtggcggtcaaatcattgagtttgtacagcgtggcaat
caagtcttgttaaccgccgtacttcctaatgacacgcctaatgatactcagctgcgtttt
gccgacgatgaacaatcacatttaacgatccaagccctgccctactcattagatgaagcg
taa
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