Shewanella sp. WE21: CKQ84_12490
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Entry
CKQ84_12490 CDS
T05404
Name
(GenBank) cysteine/glutathione ABC transporter permease/ATP-binding protein CydD
KO
K16013
ATP-binding cassette, subfamily C, bacterial CydD
Organism
shew
Shewanella sp. WE21
Pathway
shew02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
shew00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CKQ84_12490
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shew02000
]
CKQ84_12490
Transporters [BR:
shew02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
CKQ84_12490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
AAA_16
RsgA_GTPase
nSTAND1
AAA_22
AAA_29
AAA
MMR_HSR1
AAA_28
Dynamin_N
AAA_23
AAA_7
Motif
Other DBs
NCBI-ProteinID:
AVI66637
LinkDB
All DBs
Position
2866416..2868365
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AA seq
649 aa
AA seq
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MDKSLEKSLLVWLKAQKKACGLFLKLSLWLGMISAVAMVAQAYIIATILDGVIIGQVIPL
TDNAQTISSSVSIDTYTPHFIALIALMLLRALLAYGRERASFEAGKRLRGHIRAAVMDKL
TKLGPAFIKGKPAGSWASIVLEQVEDLQDFYARYLPQISLAGFIPILILAAVFPINWAAG
LILLLTAPLIPMFMILVGMGAADANRKNFSALARLSGHFMDRLKGLSTLKLFHRGDAELK
VIASASEEFRSRTMSVLRMAFLSSAVLEFFAAVSIAVLAVYFGFSYLGHLDFGYYGAHAN
ISSSTDPDMGGIPFSLFTGLFILILAPEFYQPLRDMGTHYHAKAQAIGAAEALITLLEHP
EPEFAGHVRINSIETLSADNLEVFSVDGTRLLGPLSFELKEGERLALVGPSGAGKTSLLN
ALLGFLPYKGHLLINGHELSALDLAHWRQHLAWLGQEPQLFHGTVRDNVALADPTLPDDT
LWHLLAEANISDFVKAQPLGLDAPVGEQSSGLSVGQAQRIALARALGQQASLFVLDEPTA
SLDSQSEQAVSSALNRAMAGKMCIMVTHRLDQLDQMDTILVLDKGLIVQRGYFTTLSNTH
GLFQTLLRENVESVADIELVPLSASASETQLDSDAPLDSAAESTKGDAQ
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atggataagtcgttagaaaaatcccttcttgtttggcttaaagcccagaaaaaagcctgt
ggcctgttccttaaattgtcgttatggcttgggatgataagcgccgtcgctatggtggcg
caggcttatattatcgcgacgattctggatggcgtgatcatagggcaagttataccgcta
actgacaatgcccaaacgatcagttccagcgtgagtattgatacctatacacctcatttt
attgcgctaattgccttgatgttactgcgtgccttgctggcttatgggcgtgagcgcgcc
agttttgaggcgggtaagcgtctacgtggccatattcgcgcggcagtgatggataagctt
actaagctaggtccggcatttattaaaggtaaacccgcagggagttgggcaagcatagtc
ttagagcaagtcgaagatttacaagatttttatgccagatacctcccacaaatcagcctt
gctggttttattcccatcctcattttagcggcggtattcccgattaactgggcggcaggc
ttaatcctgttactcacagcgccattaatccctatgtttatgatcttagttggcatgggc
gctgccgatgcgaatcgcaaaaatttcagtgcgctagcaagattgagcggccattttatg
gatagattaaaaggcttaagcacgttgaaactttttcaccgtggtgatgccgagcttaag
gtgatcgcgagtgcttcagaagagtttcgtagccgcactatgtcggtgctacgcatggcc
tttttaagctcagcagtcttagagttttttgccgcggtttcgattgctgtgctggcggtt
tactttggtttcagttacttaggtcacttagattttggctattatggcgcccatgccaat
attagttcaagtacagatcctgacatgggcggtattcctttcagcttatttactgggcta
tttattctgattttagctcctgagttttatcaaccgttgcgcgacatggggactcattac
catgctaaggcgcaggctataggcgcggcagaagctttgattaccttgctcgaacatccg
gaacctgaatttgccggccacgtccgtatcaatagcatagagacgctgagtgccgacaat
cttgaggtgttcagtgtcgatggcacgcgtttgcttggcccgctgagttttgagttaaaa
gagggtgaacgcttagctttagttggtccgagcggagcgggtaaaaccagtttactcaac
gccttattgggatttttaccctacaagggccatttgttgattaatggccatgagttatcc
gcattagacttagcccattggcgacagcacttagcttggcttggacaggaaccgcagtta
tttcatggcacagtgcgggataacgtggccttagccgaccccactctgcccgacgatacg
ctgtggcacttactggctgaggccaatatcagcgacttcgttaaggcgcagccattgggt
ttagatgcgccggtcggtgagcaatcttccggtttatccgtcggccaagctcaacgtatt
gctttagcaagggcgcttgggcagcaggcgagtttgtttgtcctcgatgaacccacagcc
agtttagatagccagagtgagcaggcggtgagttctgcgctgaatcgcgccatggcaggt
aagatgtgcattatggtgacccacagattagatcagttagatcaaatggatactattctt
gtgctcgataaaggcttgatagtacagcggggctactttaccactttgtctaatactcac
ggcttattccaaaccttactgcgtgaaaatgttgagtccgtggcggatattgaacttgta
ccgttatcggccagcgccagtgagacgcagcttgatagtgacgctccactcgacagtgcc
gccgagtccactaaaggagatgcccaatga
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