Shewanella sp. WE21: CKQ84_12650 Help Entry CKQ84_12650       CDS       T05404                                  Name (GenBank) L,D-transpeptidase   KO K19235   L,D-transpeptidase YbiS Organism shew  Shewanella sp. WE21 Brite KEGG Orthology (KO) [BR:shew00001]  09180 Brite Hierarchies   09181 Protein families: metabolism    01002 Peptidases and inhibitors [BR:shew01002]     CKQ84_12650    01011 Peptidoglycan biosynthesis and degradation proteins [BR:shew01011]     CKQ84_12650 Peptidases and inhibitors [BR:shew01002]  Cysteine peptidases   Family C82    CKQ84_12650 Peptidoglycan biosynthesis and degradation proteins [BR:shew01011]  Peptidoglycan biosynthesis and degradation   Transpeptidase    CKQ84_12650 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Ldt_C YkuD LysM LysM2_CERK1_LYK3_4_5 Motif Other DBs NCBI-ProteinID:  AVI66668 LinkDB All DBs Position complement(2905917..2906831) Genome browser AA seq 304 aa AA seqDB search MSMLRTTALLLTLVFPSLSALATEYPLPAAQSRLIGENQYYTVPEGKHTLEDIAAKYQLG LSNLLEANPGVDPFLPKPGSQLIIPLQLILPNAPREGIVINVAEMRLYYYPKGKKTVEVL PIGIGQIGKDTPENWVTTVQRKRANPTWTPTPRIRKEYAAKGEILPAVWPAGPDNPMGLY ALYIGNLYAIHGTNASFGIGLRVSQGCVRLRHEDIEHLFKTVPVGTRVQFVNQPIKATEE PDGKRYLAVHQPLSRTVAEFESNEPVAISLPKEIAKFIAKADTDSSVIKKLLDERTGVPM RINQ NT seq 915 nt NT seq  +upstreamnt  +downstreamnt atgagtatgcttcgcaccacagctttattattgactttggttttccctagtctgtccgct ttagcaacggaatatcctttaccagccgcccaaagcaggctaattggcgagaaccagtat tatacggttccagagggtaaacacactctcgaagatatcgcagccaaataccaacttggt ctcagtaacctactcgaagctaaccccggtgtggatccatttctgccaaaaccaggtagc caactgatcattccattgcaattgatcctgccaaacgctccccgtgaaggcatagtgatc aacgtggctgaaatgcggttgtattactatccaaaaggcaaaaagactgttgaagtgttg cctattggtattggccaaataggtaaagacacaccagaaaactgggtgaccactgtacaa cgcaagcgtgcgaatccaacttggacacccacaccgcgcattcgtaaagaatatgctgct aaaggtgaaatcctgccagcggtatggccagccggtccagataaccctatgggactgtat gcgctgtatatcggcaacttgtatgcgattcacggtactaacgcgagtttcggtattggt ttgcgtgtcagtcaaggttgtgtgcgtttacgccatgaagatatcgagcatctattcaag actgtaccagtgggaacccgggtacaatttgtgaaccagccgattaaagcaaccgaagag ccagacggtaaacgctacttagccgtgcatcaaccattgtctcgcactgtggcggagttt gaatcaaatgagcccgttgcgatatcactgccaaaagagatcgctaagtttatcgctaaa gctgacactgattcttctgtgatcaagaagctactcgatgaacgtactggtgtgccaatg cgaattaatcaataa

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