Shewanella sp. WE21: CKQ84_13270
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Entry
CKQ84_13270 CDS
T05404
Symbol
carB
Name
(GenBank) carbamoyl phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
shew
Shewanella sp. WE21
Pathway
shew00220
Arginine biosynthesis
shew00240
Pyrimidine metabolism
shew00250
Alanine, aspartate and glutamate metabolism
shew01100
Metabolic pathways
shew01110
Biosynthesis of secondary metabolites
shew01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
shew00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
CKQ84_13270 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
CKQ84_13270 (carB)
00220 Arginine biosynthesis
CKQ84_13270 (carB)
Enzymes [BR:
shew01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
CKQ84_13270 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
ATP-grasp
ATP-grasp_3
Dala_Dala_lig_C
ATPgrasp_Ter
ATP-grasp_4
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
AVI66778
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Position
3046245..3049469
Genome browser
AA seq
1074 aa
AA seq
DB search
MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEM
ADATYIEPIHWEVVRNIIAKERPDAILPTMGGQTALNCALELEAKGVLKEFNVEMIGATA
DAIDKAEDRSRFDKAMKSIGLDCPRAGIAHNMDEAYGVLDQVGFPCIIRPSFTMGGSGGG
IAYNREEFEEICSQGLELSPTSELLIDESLIGWKEYEMEVVRDRNDNCIIVCAIENFDPM
GVHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFGINPKDGRMVIIEM
NPRVSRSSALASKATGFPIAKIAAKLAVGFTLDELMNDITGGRTPASFEPAIDYVVTKVP
RFNFEKFAGANDRLTTQMKSVGEVMAIGRTFQESLQKALRGLEVSRNGLDPVTDMSKPEA
MSRIRHELKEPGCDRIWYIADAMRAGLSLDEIFKLTNIDPWFLVQIEELVQLEGVVAEAG
LAGLDIDLLRKLKRKGFADARLADVLGVNEAEVRKLRDKFDLHPVYKRVDTCAAEFATDT
AYMYSTYEEECEANPSTRDKIMVLGGGPNRIGQGIEFDYCCVHAALALREDGYETIMVNC
NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGVPV
IGTSPDAIDRAEDRERFQQAIQRLEMKQPENDTVTTVEGAVIAAERIGYPLVVRPSYVLG
GRAMEIVYDKQDLLRYFNEAVSVSNASPVLLDRFLDDAIEVDIDAVCDGEIVVIGAIMEH
IEQAGVHSGDSGCSLPPYTLSQEIQDRMRVQVGKLAMELGVVGLMNVQFAVKDNEIYMIE
VNPRAARTVPFVSKATGVPLAKIAARVMAGQSLTSQNFTKEVIPPFYSVKEVVLPFNKFP
GVDPLLGPEMRSTGEVMGVGDTFAEAYAKAQLGATSEVPKSGRALLSVRNSDKKRVADLA
AKLIELGYQIDATHGTAVILGEAGINPRLVNKVHEGRPHILDRIKNGEYTYIVNTTEGRQ
AIEDSRQLRRGALRYKVNYTTTMNAAFATCMAHAADDRTNVTSVQELHLRVLAK
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacgtacagatataaagagtattcttatcctaggcgccggcccaatcgtgatt
ggtcaggcatgtgaatttgactattctggcgcacaagcgtgtaaagcgctgcgtgaagaa
ggctaccgtgtcattctggtgaactctaaccctgccaccattatgactgatccagaaatg
gccgatgccacttatatcgagccgattcactgggaagtggtccgtaacattattgctaaa
gaacgcccagatgcgattctgccaaccatgggcggccaaaccgcactgaactgcgcatta
gaacttgaagccaaaggcgtactgaaagaatttaacgtcgagatgattggcgcgactgcc
gatgctatcgataaagctgaagaccgtagccgctttgataaagcgatgaaaagtattggt
cttgattgtccacgcgcgggcattgcccacaatatggacgaagcttatggcgtacttgat
caagtgggtttcccttgtattatccgcccatcctttactatgggtggctcgggtggcggt
atcgcttacaacagggaagagttcgaagagatctgttcacagggcttagagttatcgcca
acgagtgaactgctgatcgacgaatcactgatcggttggaaagaatacgagatggaagtg
gtccgcgatcgcaacgataactgcattatcgtctgcgccatcgaaaacttcgatcctatg
ggcgtgcacacgggcgactctattacagttgcacccgcgcaaaccctgactgataaagaa
taccaaatcatgcgtaacgcctctatggccgtactgcgtgagattggtgttgagaccggc
ggttcgaacgtacagtttggtatcaacccgaaagatggccgtatggttatcatcgagatg
aacccacgggtatcgcgctcttcagcattagcatcaaaagcaacgggtttcccgattgcg
aaaatcgccgctaagttagcagttggtttcacccttgatgagctgatgaacgacatcact
ggcggtcgcacgccagcatcattcgagcctgctatcgattacgtcgtgactaaagtgcca
cgctttaactttgaaaagtttgccggcgcgaatgaccgcttaaccacacagatgaagtct
gtgggtgaagtgatggcgattggccgtactttccaagagtcactgcaaaaagccttacgt
ggtttagaggttagccgtaacggtctagatcctgtcacagatatgtctaaacctgaggcg
atgtcgcgaatccgccacgagctgaaagagcctggttgcgaccgtatttggtacatagcc
gatgcgatgcgtgcggggctgagcttagatgaaatctttaaactgaccaatatcgaccct
tggttcctcgtgcaaatcgaagagctggttcagctcgaaggtgttgtcgctgaagcgggt
ctggcgggtttggatatcgacttactgcgtaagctgaaacgtaaaggctttgccgatgcg
cgtctggccgatgtattaggcgtgaacgaagccgaagtgcgtaagctgcgtgataagttc
gacctgcacccagtctataagcgtgtggatacctgtgcggccgagtttgcaacagacacg
gcttacatgtactcaacgtatgaagaagaatgtgaagctaacccatcgacccgtgacaaa
atcatggtgttaggtggcgggccaaaccgtatcggtcaaggtattgagttcgattattgc
tgtgtgcacgcggcgttagcgctacgtgaagacggttatgaaaccatcatggtgaactgt
aaccctgaaaccgtttcaaccgactacgacacttcagaccgtttgtacttcgaacccgtc
acactggaagacgtattagaaatcgtccgtatcgagaagccaaagggcgttatcgtgcag
tacggtggtcaaacgccattgaaattggcccgtgccttagaagctgctggcgtacctgta
attggtactagcccagatgccatcgaccgcgccgaagaccgtgagcgtttccagcaagcg
attcaacgcttagagatgaagcagcctgaaaatgataccgtgactacggttgaaggtgct
gtgattgccgctgagcgtatcggttatccgctagttgtgcgtccatcctatgtactgggc
ggccgcgcgatggaaatcgtttacgacaagcaagatttgctgcgttacttcaacgaagcc
gtgagcgtatcgaacgcgtcgccagtattgctcgatcgtttcttagatgatgcgattgaa
gtggatatcgacgcagtatgtgacggtgaaatcgtggtgattggcgcgattatggagcat
atcgaacaagcgggtgttcactctggtgactcaggttgttcactgcctccctacacgcta
agccaagaaatccaagatcgcatgcgcgttcaagtcggcaagttggcgatggaactcggc
gttgtcggtctgatgaacgtacagttcgccgtgaaagataacgaaatctatatgattgaa
gttaacccacgtgctgcccgtacagtgccattcgtatccaaagcaacgggtgtgccttta
gctaagattgccgcgcgtgtgatggcgggccaaagtttaacgtcgcaaaacttcactaaa
gaagtgatcccacctttctactcagtgaaagaagtggtgttgccctttaacaagttcccg
ggtgttgacccactgttaggcccagaaatgcgctctaccggtgaagtcatgggcgtgggc
gatacgttcgccgaagcctatgctaaggcgcagttaggtgcgacttctgaggtgcctaag
tcgggccgtgcattattgtctgtgcgtaacagtgataagaaacgcgttgccgatttagcg
gctaagttaattgagctcggttatcaaatcgatgcgactcatggtactgcggttatccta
ggcgaagcgggtatcaacccacgtttagtgaacaaggtacacgaagggcgtccacacatt
ctcgatcgcatcaagaatggtgaatacacttatattgtgaacactaccgaaggtcgccaa
gcgattgaagattctcgtcaattgcgccgcggtgcactgcgttacaaagttaactacacg
acgaccatgaacgctgcattcgccacttgtatggcccatgcagcggatgaccgtactaac
gtgacgtcagtacaagaactgcatctgcgcgtactggctaaataa
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