Shewanella sp. WE21: CKQ84_13440
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Entry
CKQ84_13440 CDS
T05404
Name
(GenBank) septal ring lytic transglycosylase RlpA
KO
K03642
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
shew
Shewanella sp. WE21
Brite
KEGG Orthology (KO) [BR:
shew00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
shew01011
]
CKQ84_13440
Enzymes [BR:
shew01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
CKQ84_13440
Peptidoglycan biosynthesis and degradation proteins [BR:
shew01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
CKQ84_13440
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DPBB_1
SPOR
DUF7537
DUF6491
Motif
Other DBs
NCBI-ProteinID:
AVI66806
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Position
complement(3086382..3087227)
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AA seq
281 aa
AA seq
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MPLKNNLLQLVALVACFTLVACSSSPNQASSSTNKKNMDPNKGRYSLKNDKLPLNPPNVD
HVPNATPKYEPYSRRGNKPYTVYGESYTVMNTGQGFSETGRASWYGEKFHGYETSNGEPY
DMYSMSGAHKTLPLPSYARITNLDNNKQVIIRINDRGPFHSDRILDVSYAAAYKLGMLGK
GTARIKLDVVYVGSVAATNSAIASAQDTGNHYIQLVASKDKAKLNTMAKNLERKYQVKTR
VQAANNMFRLQLGPIGQPELADKLLNNVKQNGFPEGYIVHE
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgccgctaaaaaataatcttttacagcttgtcgctttggttgcgtgcttcacacttgtt
gcgtgttcttcgagcccaaaccaagctagctccagcacaaacaaaaaaaatatggacccc
aacaaggggcgctattcgctaaagaatgacaagctgccactcaatccacccaatgtggac
catgtgccaaatgccacgcctaagtacgagccctatagtcgccgcggtaacaagccctat
acggtttacggcgagtcttacactgtgatgaacacaggccaaggttttagtgaaacgggc
cgtgcctcatggtacggtgaaaaatttcatggctatgagacatccaatggcgaaccctat
gacatgtattccatgtcaggtgctcataaaacgctgccactgccaagttatgctcggatc
actaacttagataacaataagcaagtgatcattcgtatcaacgatcgcgggccattccac
tcagaccgtattctcgacgtctcctacgccgccgcctataaactcggcatgctcggcaaa
ggaaccgcgcggatcaaactcgatgtggtgtatgtcggcagtgtcgcggccactaattcg
gctattgccagcgcgcaagatacaggtaatcattacattcagttagtcgcatcgaaagat
aaagccaaactcaataccatggcgaaaaatctggagcgaaaatatcaggtaaagacccgt
gtacaagccgcaaacaatatgtttagactacagctcggccccataggccaacctgaatta
gcagacaaactgctcaataacgtcaagcaaaatgggtttcctgagggctatatagtccat
gagtaa
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