Shewanella sp. WE21: CKQ84_13455
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Entry
CKQ84_13455 CDS
T05404
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
shew
Shewanella sp. WE21
Pathway
shew00550
Peptidoglycan biosynthesis
shew01100
Metabolic pathways
shew01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
shew00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CKQ84_13455 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CKQ84_13455 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
shew01011
]
CKQ84_13455 (mrdA)
Enzymes [BR:
shew01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
CKQ84_13455 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
shew01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
CKQ84_13455 (mrdA)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
AVI66809
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All DBs
Position
complement(3089407..3091263)
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AA seq
618 aa
AA seq
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MSPKKRITMHDHAAEASLFKRRALFTFFCVFALFSVLITNLYHLQVESYKDYATRSNDNR
IRVVPIAPSRGLIYDRNGILLAENLPFYSLDLVPEKISNMSETLDELGKLIEISDDERET
FTDALKFHRRFKPLTLKNQLTEEQVAIFSVNQHRFPGISVEAGLKRNYPYGAQITHVLGY
VGKINTRDRAQLERSDLWKNYAATKDIGKQGIEKFYESLLHGKPGHLEEEVNNRGRAIRT
LKIVPPEPGQDIYLTLDLKLQQKAVELLTGLRGSIVAIDPRDGGVLAMVSSPSYDPNQFV
QGINSKDYSALLNDKSRPLINRATQGQYAPASTIKPHLALLGLDEKAISESTRVWDPGFW
QIPGVERKYRDWKRWGHGWVNVYSAIVESCDTFFYELAYKVGVDHIARFMEQFGFGQNTG
IDIFEESAGNMPSKEWKRLKYNQAWYIGDTISVGIGQGYWTATPLQLANAVGIMANKGRR
LPPHLLRSIKDNTAKIDSPINELPPIELKNPRNWNIINEAMRQTANKSRFTDATYTAAMK
TGTAQVIGVAENTKYDASKIAEHFRDNALVVAYAPFEDPKIVLAVVMENAGWGGANAGPV
ARAMLDEYMLRDTWKPIP
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgccaaaaaagcggataacaatgcatgatcacgccgccgaggcgtctctttttaag
cgcagggcgcttttcacttttttttgcgttttcgctctatttagcgtattaatcaccaac
ctttatcatttacaggttgaatcctataaagattatgcaactcgctcaaatgataatcgc
attcgtgttgttccaattgcccctagtcgtggtctcatttacgatcgcaacggtatactt
ttagctgaaaatttacccttttattccctcgatctcgtgcctgaaaaaatcagtaacatg
tcagagaccttagatgaactcggcaagttaattgagatcagtgatgatgagcgcgaaacc
tttactgacgccctgaaatttcatcgccgtttcaaaccgctaacactgaaaaaccagctc
accgaagaacaagtggccattttcagtgttaaccaacacagatttccggggatttcggtc
gaagcgggtcttaaacgtaactatccctacggcgcgcaaatcacccatgtgctgggctat
gtaggtaaaattaacacccgagatcgcgcccaacttgaacgcagcgatctgtggaaaaac
tatgcggcaaccaaagacattggtaagcaaggcattgaaaaattttatgaatctttgctg
catggcaaacccggacacttagaagaagaagtgaacaaccgcggtcgcgccattcgcacc
ttaaaaattgttccgccagagccggggcaagatatttacctcaccttagatctcaagctg
caacaaaaagcggtggaactactcacaggtctgcgtggttctattgttgccatcgatccc
cgtgacggtggagtattagctatggtatcgagcccaagctatgatccaaaccagtttgta
caaggcattaatagcaaagattacagtgcgttactcaatgataaatcccgccctttgatc
aaccgtgcgactcaaggtcaatatgcacctgcgtctaccatcaagcctcacctcgcactg
ttaggccttgatgagaaagccattagcgagagtacccgagtgtgggatcccggtttttgg
caaatacctggtgttgaacgtaaataccgcgactggaaacgctgggggcatggctgggtc
aacgtttatagcgcgattgtagaatcctgcgatacctttttctatgagttagcctataag
gtcggtgtcgatcatatcgcccgctttatggaacaatttggctttggccaaaatacaggg
attgatatctttgaagaatcggctggcaatatgccatccaaagaatggaaacgcttaaag
tacaatcaagcttggtatataggcgacaccatttccgtaggtattggccaaggttattgg
acggcaacgccattacaactcgctaatgccgttgggattatggccaacaaaggccgccgt
ctcccgccacatctgctgagatccattaaagacaatactgccaaaattgactcaccgatt
aatgagttaccgccaattgaacttaaaaatccccgtaactggaacatcatcaacgaagct
atgcgccaaactgcaaataagtcacgctttaccgatgccacttacactgccgcaatgaaa
accggtactgcacaggtcatcggcgtggcggaaaatacgaaatacgatgccagtaaaatt
gccgaacatttccgcgataatgccttagttgtggcctatgcgcccttcgaggatcctaaa
atcgtcctcgccgtcgtgatggaaaacgcaggttggggcggcgcaaatgctggcccagtc
gctcgagctatgctcgatgaatatatgcttagagatacttggaaacccataccatga
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