Shewanella sp. WE21: CKQ84_13460
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Entry
CKQ84_13460 CDS
T05404
Name
(GenBank) 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH
KO
K00783
23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:
2.1.1.177
]
Organism
shew
Shewanella sp. WE21
Brite
KEGG Orthology (KO) [BR:
shew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shew03009
]
CKQ84_13460
Enzymes [BR:
shew01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.177 23S rRNA (pseudouridine1915-N3)-methyltransferase
CKQ84_13460
Ribosome biogenesis [BR:
shew03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CKQ84_13460
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPOUT_MTase
Motif
Other DBs
NCBI-ProteinID:
AVI66810
LinkDB
All DBs
Position
complement(3091325..3091795)
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AA seq
156 aa
AA seq
DB search
MKLQLIAVGTRMPDWVTRGFEEYQRRFPRDMALELIEIPAGKRGKNADIVRILQKEGEQM
LAAIPKGNHIVSLDLPGKNWTTPELATALTKWQLDGRDVSLLIGGPEGLAPACKEAANQS
WCLSALTLPHPLVRVVVAESLYRAWSVNTNHPYHRE
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atgaagttacagctcatcgcagtaggaacacggatgcccgattgggttacccgtggtttc
gaagaataccagcgccgttttccccgtgatatggcgctggagcttatcgaaatacccgct
ggaaagcgggggaaaaatgccgacattgtccggatacttcaaaaagaaggcgaacaaatg
ttggcggccattcccaaaggcaatcatattgttagcttagatctccccggcaaaaactgg
acgacccccgagctagcaaccgcactgactaaatggcaactcgatggtcgcgacgtcagt
ttactgattggtggacctgaaggattagcgccagcttgcaaagaagcggcaaaccaaagt
tggtgtctttcggcattaaccttacctcacccactcgtacgggtggtggttgccgaaagt
ttgtaccgcgcgtggagcgtgaacacgaatcacccctaccatagagaatag
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