Shewanella sp. WE21: CKQ84_13675
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Entry
CKQ84_13675 CDS
T05404
Symbol
nusA
Name
(GenBank) transcription termination/antitermination protein NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
shew
Shewanella sp. WE21
Brite
KEGG Orthology (KO) [BR:
shew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shew03021
]
CKQ84_13675 (nusA)
03009 Ribosome biogenesis [BR:
shew03009
]
CKQ84_13675 (nusA)
Transcription machinery [BR:
shew03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
CKQ84_13675 (nusA)
Ribosome biogenesis [BR:
shew03009
]
Prokaryotic type
rRNA transcription factors
CKQ84_13675 (nusA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
S1
DUF2187
KH_NusA_C
S1_RRP5
Glyoxalase_4
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
AVI66842
LinkDB
All DBs
Position
3125490..3126989
Genome browser
AA seq
499 aa
AA seq
DB search
MNKEILLVAEAVSNEKAVPREKIFEALEIALATATKKKYEGDIDVRVAIDRKTGGYDTFR
RWMVVDDHGEALENPYREITLEAARYENPDIQPGEFIEDDIESVVFDRITTQTAKQVIVQ
KVREAERAQVVEQFQDQEGELITGVVKKATRESVVVDLGNNADGVLFREDLISRESFRPG
DRVRALLYSVRPEARGAQLFLSRTKPEMLIELFRVEVPEIADELIEIMGAARDPGARAKI
AVKSNDRRIDPIGACVGMRGARVQAVSNELGGERVDIVLWDDNPAQYVINAMAPADVASI
IVDEDNHSMDIAVEADSLAQAIGRNGQNVRLATQLTGWVLNVMTVEDMNKKHQAESAKVV
DLFVNSLDVDEDFAQVLADEGFTSLEEVAYVPVSELLAIDGFDEDLVEALRERAKAAIST
RALATEEALDGVEPSEELLALEGVERHLAYVFASKGIVTLEDLAEQGIDDLIEIEELTEE
KAGELIMAARNICWFGEEA
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagagattctgctagtcgctgaggcggtttcaaatgaaaaggccgttccacgc
gagaaaatttttgaagcgctagagattgctctggccacagcaaccaagaaaaagtacgaa
ggtgatattgacgttcgtgttgctatcgaccgtaaaaccggtggttatgatactttccgt
cgttggatggtggttgatgatcacggtgaagcgttagaaaacccttatcgtgaaatcacg
ttagaagcggcacgttacgaaaatccggacatccagcctggcgagtttatcgaagacgat
atcgagtcagtggtgtttgaccgtattaccactcaaactgctaagcaagtgatcgtacag
aaagtacgtgaagctgaacgtgcgcaagtggttgagcagttccaagatcaagaaggtgag
ttaatcactggtgtggtcaaaaaagcgactcgcgagagcgtagtggttgacttaggtaat
aacgctgacggcgtattgttccgtgaagacttaatttcacgcgaatctttccgccctggt
gaccgtgtgcgtgcattattgtactcagtacgtccagaagctcgtggtgcacagttattc
ttaagccgtactaagcctgaaatgctgatcgagcttttccgtgttgaagtgcctgaaatc
gctgacgaactgattgaaatcatgggcgctgctcgtgatccaggcgctcgcgctaagatc
gccgttaagtcgaatgatcgccgtattgatcctatcggtgcgtgtgtgggtatgcgcggt
gcgcgtgtacaagccgtttcgaatgaactgggtggcgaacgtgttgatatcgtgttgtgg
gatgataatccagcacaatacgtgatcaatgccatggcgccagccgatgttgcctctatc
atagtcgacgaagataaccattctatggatatcgctgttgaagccgatagtttggcacaa
gccattggacgtaatggccagaacgtacgtttagcaacacaactgactggttgggttctg
aacgttatgacagtggaagatatgaataagaaacatcaggcagaaagtgccaaggtggtt
gatttatttgttaactcactggatgtcgatgaagattttgcacaagtactggcagatgag
ggctttacgtcgctcgaagaagttgcctatgtgcctgtgtctgaactattggcgattgac
ggttttgacgaagatctcgtcgaagctttacgtgaacgtgcaaaagcggcgatctcaact
cgagctctcgctactgaagaagcactggatggtgtggagccaagtgaagagttgctagca
cttgaaggtgttgaaagacacttagcctatgttttcgctagcaaaggtattgtgactcta
gaagacttggctgaacaaggcattgatgatttgatcgaaattgaagaattgacagaagaa
aaagcaggtgagctcatcatggcagcccgcaatatctgttggtttggcgaagaagcataa
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