Shewanella sp. WE21: CKQ84_13945
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Entry
CKQ84_13945 CDS
T05404
Name
(GenBank) AraC family transcriptional regulator
KO
K07506
AraC family transcriptional regulator
Organism
shew
Shewanella sp. WE21
Brite
KEGG Orthology (KO) [BR:
shew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shew03000
]
CKQ84_13945
Transcription factors [BR:
shew03000
]
Prokaryotic type
Helix-turn-helix
AraC family
CKQ84_13945
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
AVI66893
LinkDB
All DBs
Position
complement(3194315..3195175)
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AA seq
286 aa
AA seq
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MEPKYISFDKSAKTCIRKQAITEDLSWAHYQNAGERLYYQNDAQHTLSMYLDGGYETHRT
DIKADYGAPSKFCLMPQGCQSHWQLGQPQQFMHLYFSDEHLKKLAVRVFDKDPRQVRLPE
LTFVDNPRLEALFRHQVAGLDWQTSDHHLMMEQVTDTVLVTLLQSSGFNLSVGPIKGGLA
PKVAKAIKEFIHCHSHRQIYLSELAELAQLSEYHFCRMFKCQFAMTPQEYLLQVRIEKVK
QSLSHSTQSLTDIALNNGFANQSHMGRYFKKLCGMSPGEYQKYHRS
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggagcccaaatacatcagttttgataaatccgccaaaacctgtattcgtaagcaagcg
attacggaggatttatcttgggcccattatcaaaatgcgggcgagcgtctgtattaccaa
aacgatgcacaacatacgctgagcatgtatctggatggcggctacgaaacccacagaacc
gatatcaaggccgactatggcgcgcccagtaagttttgccttatgccccaaggctgccaa
agccattggcaactgggacaaccgcagcagtttatgcatttgtattttagcgatgaacat
cttaaaaaattggcggtgcgagtctttgataaagatccacgccaagtgcgtttacctgag
ttgacctttgtcgataatccgagattagaggcgctgtttcggcaccaagttgccgggctc
gattggcagacgagtgatcaccatctgatgatggaacaagtaaccgacactgtgctggtg
actttgctgcaaagctcaggctttaatttgtcggtggggccaattaagggtggactcgca
cctaaagtggccaaagcgatcaaagagtttattcattgccattcccataggcagatttac
ttgtctgagttggccgagcttgcccaactgagcgagtaccatttttgtcgcatgtttaaa
tgccaatttgcgatgacgccgcaggagtatttgctgcaagtgcgcattgaaaaggtcaaa
caaagcttgagccattcaacgcaatccttgaccgatatcgccctcaataatggctttgcc
aatcaaagtcatatggggcgttactttaaaaaactctgcggcatgtcaccgggcgaatat
caaaaataccatagaagctaa
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