Shewanella sp. WE21: CKQ84_14055
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Entry
CKQ84_14055 CDS
T05404
Name
(GenBank) LysR family transcriptional regulator
KO
K18927
LysR family transcriptional regulator, L-lactate utilization regulator
Organism
shew
Shewanella sp. WE21
Brite
KEGG Orthology (KO) [BR:
shew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shew03000
]
CKQ84_14055
Transcription factors [BR:
shew03000
]
Prokaryotic type
Helix-turn-helix
LysR family
CKQ84_14055
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_8
HTH_30
HTH_20
HTH_IclR
DUF2089
HTH_34
Motif
Other DBs
NCBI-ProteinID:
AVI66911
UniProt:
A0A2R3EW30
LinkDB
All DBs
Position
3219822..3220721
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AA seq
299 aa
AA seq
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MSDDLGAELQLVYLFVHLVNAGSFSQAAKELDMPIATVSRKLAKLEEKLDKQLFMRSTRK
LRLTEEGLALFQRYQSVVAQFDELSGLGSDKPEGTLRIAAPISIISIVFIQALNEFGRLY
PDIRLHISQSNELVDLIDKGIDVAIVGGAQPDSSWVSSTLGELDYCLFATPEYLAQAPKL
EHPDDLEAHQLIKVWPLFNWHLKHPSGESFYFNGPTKLTLTDLHGAIQATLGHGGILYGP
ELFVKQQIKEGKLKVLLPEWIGEQRRISILYHQRSQQPLKVRVFIEFMQSKAPELFSMR
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatgatttaggcgctgaactacaacttgtctatctttttgtgcatttagtcaat
gcgggcagtttttcgcaggcggcgaaggagcttgatatgcccattgccacagtgagccgc
aagttagcgaagttggaagagaagctcgataaacagctctttatgcgcagcacccgcaag
ttgcgactgacagaggaagggctggcgctctttcaacgttaccagagcgtggttgctcaa
tttgatgaactaagtggtttaggcagcgataaacccgagggaaccttgcgcatcgcggcg
ccgatttcgattatttccatcgtgtttattcaagcattaaatgaatttggccgcctatat
cccgatatccgtttacacatttcccagagcaatgagttagtcgatttgatcgacaaaggc
atagatgtggcgattgttggcggggctcagcctgattcttcttgggtgtcgagtacctta
ggcgagctcgactattgcctgtttgccacaccagaatatttggctcaggcgcctaaactt
gagcatcccgatgatcttgaagcccatcaactgataaaagtctggccgctgtttaattgg
catttaaagcatccaagcggcgagtctttttattttaatggcccgactaagctcaccctc
acggacttacacggagcgattcaggctactttaggccatggcgggatcttgtatggtcct
gaactatttgtaaaacagcagattaaagaggggaaacttaaagtattactgccggaatgg
attggcgaacagaggcgaatttcgattttatatcatcagcgcagccagcagccgctaaag
gtaagagtctttattgagtttatgcagtcaaaggcgccagagttattctctatgcgttga
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