Shewanella sp. WE21: CKQ84_14395
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Entry
CKQ84_14395 CDS
T05404
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
shew
Shewanella sp. WE21
Pathway
shew03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
shew00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CKQ84_14395 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shew03400
]
CKQ84_14395 (mutS)
DNA repair and recombination proteins [BR:
shew03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
CKQ84_14395 (mutS)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
DUF4595
Motif
Other DBs
NCBI-ProteinID:
AVI66977
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Position
complement(3289739..3292309)
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AA seq
856 aa
AA seq
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MNVIDTDDLEKHTPMMRQYLTMKAEHHDMLLFYRMGDFYELFYDDAKRASELLGISLTAR
GKSGGDPIPMAGLPYHAVEGYLAKLVQIGQSVAICEQIGDPATSKGPVERKVVRIVTPGT
LTDEALLQERQDNLLAAVYQGKVGFGYATLDVSSGRFVIAELDTRESLEAELQRTNPVEI
LYSEDFGELGLLNGFKGKRRRPEWEFDYDTSIKLLLAQFGTKDLHGFGIADARLSLQAAG
CLMQYVKDTQRTALPHINAIIRFNQTDSIVLDAATRRNLELTQNLAGGRDNTLAAVLDNT
ATPMGSRMLQRWIHQPLRDPKQIKARQQAVTELLDTAAHEGLHEQLKALGDIERIMARLA
LRTARPRDFARLRQALGLLPELQQSLSTLSAPHTTQLRQHLGEFPAEQALLERAIVDNPP
MLIRDGGVIREGYNSELDEWRGLSEGASDYLVQLEAREKERTGINTLKVGYNRVHGYYIE
VSRLQSSQVPLNYQRRQTLKNMERYITPELKEYEEKVLSSQGKALALEKQLWEQLFDLIL
PKLHELQAFARAAAELDVLSNFAERAETLGYTCPELRQDIGVQIEAGRHPVVERVSQTPF
IANPVTLHNQRRMLIVTGPNMGGKSTYMRQVALITLMAHIGCFVPADRALIGPIDRIFTR
IGASDDLASGRSTFMVEMTETANILHNATASSLVLMDEIGRGTSTYDGLSLAWSAAEYLA
QQVGAMTLFATHYFELTQLPELMTGVYNVHFDAIEHEDTIAFMHAVQEGAASKSYGLQVA
ALAGVPNKVIKAAKHKLQQLESRDHQPEGTRTPIQSLLALPEPVENPALTKLSSINPDNL
TPKQALDLLYELKRLS
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtaattgataccgatgatttagaaaaacatactcctatgatgcgtcagtacttg
acgatgaaagcagaacatcacgatatgttgctgttttatcgcatgggtgacttctacgag
ttgttttatgacgatgctaaacgcgcttctgagctattaggcatttcactcactgcgcgc
ggtaaaagtggtggcgatcctattccgatggcgggacttccctaccatgctgtggaaggc
tatcttgcaaaattagttcaaattggtcaatcagttgcgatttgcgaacagattggcgat
cccgcgacatctaaagggccagtagaacgtaaagtggtgcgaattgtaacaccaggcacc
ttaaccgacgaagcgttgctacaagaacgccaggacaatctgttagccgcggtttatcaa
ggtaaagtcggttttggttatgccacattagatgtttcatccggacgttttgtgattgct
gagctcgacacccgagagtcattagaagcagaattgcaacgcactaatcccgttgaaatt
ctctacagtgaagactttggcgaactaggtctacttaacggttttaaaggcaaacgccgt
cgccccgagtgggaatttgattacgatacgagtatcaagttactactggcccagttcggt
actaaagacttacatggttttggcatcgcagatgcacgtttatcactgcaggctgcaggt
tgcttgatgcaatatgtcaaagacacacagcgcacggcactgccccatatcaatgccatt
atccgcttcaatcaaaccgatagcatagtactcgatgcggcaactcgccgaaatttagaa
ttaactcaaaaccttgccggtggccgcgataataccttagcggcagtattggataatacg
gcaacgcctatgggcagccgtatgttacaacgctggatccatcagcctctgcgagatcct
aagcaaatcaaggcgcgccaacaggcggtgactgaactcctcgataccgcagcccacgaa
ggtttgcatgagcagttaaaggcacttggcgatatcgaacgtatcatggcaagactcgcg
ctgcgtaccgctcgcccaagagactttgcacgtttacgtcaagcactgggcttattgcct
gaattacaacagagtttaagtacactgagcgcgccacacacgactcaattgcgtcaacac
ttaggtgagttccccgctgagcaagccctgcttgagcgcgcgatagtcgataatccacct
atgcttatccgcgatggaggagtgatccgtgaaggctacaacagcgaattagatgaatgg
cgcggtcttagcgaaggagcgagtgattacttagtacaactcgaagccagagaaaaagaa
cgtacaggtatcaacacacttaaagtcggctataaccgtgtacacggctattacattgaa
gtgagccgcttgcaatcctcgcaggtaccgctcaattatcaacgacgtcaaacccttaag
aatatggagcgttatatcacgcccgaacttaaggagtacgaagaaaaagtgctctcgagc
caaggtaaagcgctggcactcgaaaagcagttatgggaacagttgttcgatcttattctg
ccaaaattgcatgaattacaagcttttgctcgagcggcggctgagcttgatgtgttgagt
aactttgctgagcgcgccgaaaccttaggctacacttgcccagagctgcgccaagatatc
ggcgtacagatagaggctggtcgtcacccagtggtggagcgtgtcagtcaaacaccgttt
atcgctaaccccgtgaccttgcacaatcaaagacgtatgttgattgtgactggacctaac
atgggcggtaaatcgacctatatgcgccaagtcgccttgatcacgctgatggcccacatt
ggctgttttgttccagcagatcgcgccctgattggcccgattgatcgcatctttacccgt
attggcgcatcagacgatctggcctctggccgctcaacctttatggtagaaatgactgaa
actgccaacatcctgcacaatgccactgccagtagtttagtgttaatggatgaaatcggc
cgtggaacatccacctatgatggtttatcgctagcttggtcggcggcggaatatttagcc
cagcaagtcggggctatgaccctattcgccacccattattttgaattaactcaattgcct
gagctaatgacaggcgtgtataacgtgcactttgatgccattgagcatgaagataccatc
gcctttatgcatgcggtacaggaaggcgccgccagtaaaagctacggcttacaagttgcg
gcgcttgccggcgtgccaaacaaagtgattaaagcagcgaaacataaattgcagcaattg
gagagtcgcgatcaccaaccagaaggaacgaggacgcccattcaaagcttactcgcttta
cctgaaccggttgaaaatccagctttgactaaattaagtagcattaatcccgataactta
acgccaaaacaggcgcttgatttgctctatgaactgaaacgcttgagctag
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