KEGG   Shewanella sp. WE21: CKQ84_14475
Entry
CKQ84_14475       CDS       T05404                                 
Name
(GenBank) DNA polymerase III subunit chi
  KO
K02339  DNA polymerase III subunit chi [EC:2.7.7.7]
Organism
shew  Shewanella sp. WE21
Pathway
shew03030  DNA replication
shew03430  Mismatch repair
shew03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:shew00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CKQ84_14475
   03430 Mismatch repair
    CKQ84_14475
   03440 Homologous recombination
    CKQ84_14475
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:shew03032]
    CKQ84_14475
   03400 DNA repair and recombination proteins [BR:shew03400]
    CKQ84_14475
Enzymes [BR:shew01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CKQ84_14475
DNA replication proteins [BR:shew03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     CKQ84_14475
DNA repair and recombination proteins [BR:shew03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     CKQ84_14475
SSDB
Motif
Pfam: DNA_pol3_chi DUF1496
Other DBs
NCBI-ProteinID: AVI66985
LinkDB
Position
complement(3303551..3304054)
AA seq 167 aa
MTQVLFYLMPPVASPAKAKADSPVATANANPALCEMHLLACQLAQQAFVKQQWVYIHCQD
KQQAHAIDELLWQFEPSAFVPHNLKGEGPMTGSPVEIGFDRLGANKSRQVLINLADQAPP
FAVNFGHIIDFVANDDQHKAVARERYRQYRGLGVNLQTQDLATHPLN
NT seq 504 nt   +upstreamnt  +downstreamnt
atgactcaagtgctgttttatcttatgccgccagtggcatcgcctgccaaagccaaggct
gattcacctgttgcaaccgcgaatgcgaaccctgcgctttgcgagatgcatcttctggca
tgccaactggcgcagcaggcttttgtgaagcaacaatgggtctatatccattgccaagat
aaacagcaagcccatgcaattgatgaacttttatggcagtttgagccaagtgcctttgta
cctcataacctcaaaggtgaaggcccgatgacgggatcgccggtagaaattggttttgat
cgcctcggcgccaacaaaagtcgccaagttctgattaatcttgcagaccaagcgccccca
tttgcggtaaactttggccacattatcgattttgttgccaatgacgatcagcataaagcg
gtcgctcgcgaacgttatcgacagtatcgcggcttaggggtcaatttacagacccaagac
ttagcaacacatccacttaattag

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