Shewanella sp. WE21: CKQ84_14485
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Entry
CKQ84_14485 CDS
T05404
Symbol
lptF
Name
(GenBank) LPS export ABC transporter permease LptF
KO
K07091
lipopolysaccharide export system permease protein
Organism
shew
Shewanella sp. WE21
Pathway
shew02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
shew00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CKQ84_14485 (lptF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shew02000
]
CKQ84_14485 (lptF)
Transporters [BR:
shew02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Lipopolysaccharide transporter
CKQ84_14485 (lptF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LptF_LptG
LMBR1
Motif
Other DBs
NCBI-ProteinID:
AVI66987
LinkDB
All DBs
Position
3306148..3307260
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AA seq
370 aa
AA seq
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MIVFKYLIREVLKAQIAVLLVLLTIFISQHFVRILADASDGDFPASLIMTLIGLNLPYLV
ILVLPLSLFLGILLAHGRMYSENEMVILHGVGVSEWYVTRVTLILAVINMLFTGYLSLYV
APWAEEQQNQVLEKAQSEAGLAALIQGRFQASPNGRAVLFVERIGKDNELDKVFVAQLPD
PDDETGVTNVVVAKGGRVQEDSSGAQQLNLNDGVRYQGSPKAKDYQMIEFGGYKMQIKEQ
QVDERRRKLSALPVDELVKIEGAEAAAEFHWRLAIPLAIPIMTLIAVPLARVNVRQGKFA
KMFPAVLLYLGYFGLMVAGRKALQDGIIPLYLGMWWIHVSALLMGLFLLGKDRPIFSRIS
SLFATKKVAA
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
gtgattgtatttaaataccttattcgagaagttttaaaggcacaaattgcggtactttta
gtgctgttaactatttttattagccagcatttcgtgcgtatactggccgatgcctccgac
ggcgattttcccgcctctttaatcatgactctgattgggcttaacttgccttatctggtg
atcttagtgctgccgttaagtttgttcttgggtattttactggcccacggccgtatgtat
tccgaaaatgaaatggtcattctccacggtgttggggtcagtgagtggtatgtcacccgc
gtgacgctgatcctcgccgtgatcaatatgctgtttactggctatttatccctttatgtt
gctccttgggcagaagaacagcaaaaccaagtgctcgaaaaagcccagtccgaagcaggt
cttgccgccttaatccaagggcgttttcaggcgagtcccaatggtcgcgcggtattattt
gttgagcgtattggtaaagataacgagttagataaagtgtttgtagcccagttgccagat
cctgatgatgaaactggcgtgaccaatgtcgtggtggctaaaggtggacgagtacaggaa
gatagttcaggtgctcaacaattgaacttgaatgatggcgtacgttatcaaggcagcccg
aaggcgaaggactaccaaatgatcgaatttggtggttataaaatgcaaattaaagagcag
caagttgatgagcgtcgccgtaagttatctgcattgcccgttgatgaactcgttaaaatt
gaaggtgctgaagctgcggctgaattccactggcgtcttgctatcccgctcgcgattcca
attatgaccctgattgctgtgccgttagcgcgggtgaatgtgcgccaaggtaagtttgct
aagatgttcccggcagtacttttgtaccttggctattttggactgatggtcgcgggacgt
aaggcattgcaagatgggattattccactgtatttaggtatgtggtggatccatgtttct
gcgctcttgatggggttattcttgctcggcaaagataggcctattttcagtcgtatatcg
tccttgtttgccactaagaaggtggcagcatga
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