Shewanella sp. WE21: CKQ84_14745
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Entry
CKQ84_14745 CDS
T05404
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
shew
Shewanella sp. WE21
Brite
KEGG Orthology (KO) [BR:
shew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shew03400
]
CKQ84_14745
Enzymes [BR:
shew01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
CKQ84_14745
DNA repair and recombination proteins [BR:
shew03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
CKQ84_14745
Prokaryotic type
CKQ84_14745
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AVI67033
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Position
3362219..3363721
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AA seq
500 aa
AA seq
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MILANDSMQIDSIPIKVQGNNALMWFRQDLRLADNQALTAACDWARENGVALKAIYIATP
TQWQRHDVAPIQLDFIERHINLLAQGLASLGIGFELIQLETFADVPEFIGHYCQQQGIGR
VFAGCEPEINEQQRDQACIQSGIPLVLTDEHCLLKPGTVLNLSGDMYKVFTPFSRKWREI
AARYAILPLPVPAPLGPVLAEPKPLLFNNVTKVSSELWAAGEGQTKRLLSAFIKQKVQDY
KQDRDFPAIDGTSSISPYLAIGVVSPRQCVAALLHHFPEVIVDDTSPARTWLNELTWREF
YRHLLVAFPDLSKNHNFNRQADHVQWRNNPQEFAAWCEGRTGYPIVDAAMRQLNQTGWMH
NRLRMVVASFLTKHLLIDWRWGERYFRQKLIDGDLAANNGGWQWSAGCGCDAQPYFRIFN
PISQSEKFDPDGSFIRKYLPELASWGIKQLHQPSTAQTPSLFEQPLFNTKTAYPSAIVEH
SAARARALTVLGVLKKATAQ
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgatattagctaacgattcaatgcaaatagattcaattccaataaaagtgcagggcaat
aatgcactgatgtggtttcgccaagatttacgccttgccgataatcaggcgttaaccgca
gcctgtgattgggcgcgggagaatggcgtggcacttaaggcgatttatatcgctacacca
acccagtggcagcgccatgacgttgcgccaattcagttggattttatcgaacgtcatatc
aatttacttgcccaaggactggcgagtcttggtattggattcgagttaattcagttagag
acctttgctgatgtacctgagtttatcggtcactattgccagcaacaggggattggtaga
gtgtttgctggttgcgagcctgagattaacgagcaacagcgcgaccaagcctgtattcaa
tcggggattcctctggtgttaaccgatgagcattgtttgcttaagccgggcactgtgctg
aatttgtccggcgacatgtacaaggttttcactccttttagccgtaagtggcgagaaatt
gccgcccgctatgccattttgccgcttcctgttccggcgccacttggacctgtgttggcc
gagccaaagccgcttttgtttaacaatgtcactaaagtgtcgagtgaactttgggctgcg
ggagaagggcagacaaagcgtttactctcggcatttattaagcagaaagtgcaggattat
aagcaagatagggatttccccgccattgatggcactagttcaatttcaccctatctggcc
attggtgtggtgagcccaagacaatgcgttgccgcgctgctgcatcacttccctgaggtg
attgtcgacgatactagccctgctcgtacttggttaaatgagcttacttggcgtgagttt
taccgtcacttgctggtggcatttcccgatttatctaagaatcacaatttcaatcgtcaa
gccgaccatgtgcagtggcgcaataacccgcaggagtttgctgcttggtgtgaaggtcgt
actggctatccgattgtcgatgcggcaatgcgccagctcaatcaaacgggttggatgcac
aatcggctgcgtatggtggtggcgagtttcctgactaaacatctgctgattgactggcgc
tggggcgagcgctatttccgccaaaaactgattgatggtgacttagccgcgaataatggc
ggctggcagtggtctgcgggttgtggctgcgatgctcagccttatttccgtatttttaat
cctataagccagagtgaaaagtttgatccagatggcagctttatccgtaagtatttacca
gagctcgcatcttggggaattaagcaattacatcaacccagtacagcgcagacaccgtcc
ttgtttgaacagccgttattcaacactaaaacggcttatccaagtgcgattgtcgagcac
agtgcagcaagagcaagggcattaacagtattaggcgtattgaaaaaggccacggcccaa
taa
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