Shewanella sp. WE21: CKQ84_14840
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Entry
CKQ84_14840 CDS
T05404
Name
(GenBank) A/G-specific adenine glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
shew
Shewanella sp. WE21
Pathway
shew03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
shew00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CKQ84_14840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shew03400
]
CKQ84_14840
Enzymes [BR:
shew01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
CKQ84_14840
DNA repair and recombination proteins [BR:
shew03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CKQ84_14840
Prokaryotic type
CKQ84_14840
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUDIX_4
HhH-GPD
HHH
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
AVI67046
LinkDB
All DBs
Position
complement(3374898..3375989)
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AA seq
363 aa
AA seq
DB search
MKSTASFATRIVSWYDNHGRKTLPWQQDKTLYRVWVSEIMLQQTQVATVIPYYLKFMARF
PDVLALANAPDDEVLHHWTGLGYYARARNLHKAAKIIRDDYQGLFPTHFEQVLALPGIGR
STAGAVLSLSLGQHHPILDGNVKRVLARHGAIAGWPGQKTVEEQLWQLTNAFTPQQDIQK
YNQAMMDIGASICTRSKPNCAACPVAIDCKAQLIGRQTDFPGKKPKKTIPTKAAWMLVMM
QDNQVFLAKRPPAGIWGGLWCFPEFATQAALETHLEEQGFDAQQLEWLTGFRHTFSHFHL
DIQPMMLNLDKALGNKESVGAVMEQNQSLWYNISHPSKVGLAAATERVLANLGSLVQSAV
SKE
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgaaatctacagcctccttcgctacacgtatcgtctcttggtacgacaatcacggtcgt
aaaaccctcccttggcagcaagataaaaccctatatcgcgtatgggtttctgaaatcatg
ctgcaacaaactcaggttgcgactgttattccctattatcttaaatttatggcgcgtttt
cccgatgtgttagcacttgctaacgcgccagacgatgaggtattacatcattggaccggt
cttggctattacgctagggcgcgtaatctgcataaagcagccaaaataatccgcgatgat
tatcagggattatttccaacacattttgaacaagtgctcgccctacccggcatcggccgc
tcgacggcaggcgcagtattgtcattgtcacttgggcaacatcaccccattctcgatggc
aacgtaaaacgtgtattagcaagacatggggcaatagcaggttggccagggcaaaagacg
gttgaagagcaactttggcaactgacgaatgccttcacaccgcagcaagatattcagaaa
tataatcaagccatgatggatatcggcgccagtatttgcactcgtagcaaacctaactgt
gccgcttgccctgtagcgattgattgcaaagctcaactgattggcagacaaaccgatttc
cctggcaaaaaacctaaaaaaaccatacccaccaaagcggcgtggatgttagtgatgatg
caagacaaccaagtctttctagctaaacgtccgccagcgggaatttggggcgggctctgg
tgtttccctgaattcgctacccaagccgcccttgaaactcatcttgaagagcaagggttt
gatgcgcagcaactcgaatggttaactggctttaggcacacatttagccactttcattta
gatattcagcccatgatgcttaatctagataaagccctcggcaataaagagagcgtgggc
gctgtcatggaacaaaaccagtctctctggtataacataagtcatccttccaaagtggga
ctcgccgccgccaccgagcgcgtgctagccaatttgggatcactcgttcaatccgcagtc
agtaaggaataa
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