Shewanella sp. WE21: CKQ84_15085
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Entry
CKQ84_15085 CDS
T05404
Name
(GenBank) histidine--tRNA ligase
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
shew
Shewanella sp. WE21
Pathway
shew00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
shew00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CKQ84_15085
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
shew01007
]
CKQ84_15085
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shew03016
]
CKQ84_15085
Enzymes [BR:
shew01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
CKQ84_15085
Amino acid related enzymes [BR:
shew01007
]
Aminoacyl-tRNA synthetase
Class II (A)
CKQ84_15085
Transfer RNA biogenesis [BR:
shew03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
CKQ84_15085
Prokaryotic type
CKQ84_15085
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
tRNA-synt_His
tRNA-synt_2b
HGTP_anticodon
tRNA-synt_2
XFP_C
Motif
Other DBs
NCBI-ProteinID:
AVI67092
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Position
3420746..3422023
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AA seq
425 aa
AA seq
DB search
MAKQIQAIRGMNDILPTQSPLWQKVEAVLRSSVSAYGYSEIRTPIVENTDLFKRSIGEVT
DIVEKEMYTFADNNGDSLTLRPEGTASTVRAGNENGLLYNQEQRLWYMGPMFRHERPQKG
RYRQFNQFGVEVYGIGSADIDAEVLMLSARLWEKLGISEHVSLELNTLGDPAERAVYRDA
LIAFLELHKDALDEDSKRRMYSNPLRVLDSKDQNVQAILVDAPELMDFLGEESKTHFSQL
RELLDAVGIKYTINPRLVRGLDYYNRTVFEWVTSSLGSQGTVLAGGRYDGLVAQLGGKDT
PAVGFAMGLERIVLLLETLELTKDIPPEVDVYVTAMGDSCLVEAIKVAQELRNALPNLKV
MSHCGGGNVKKQMKRADKSGASVALLIGEDELAEGMVTVKHLRNDIEQQRVARSALGAFL
AELIK
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaacagatccaagcgattcgcggaatgaatgacattctgccaactcaaagtcct
ctatggcaaaaagtggaagcggtactacgttcgagcgtcagtgcttacggttacagcgaa
atccgcactccaatagtggaaaatacagatctttttaaacgctctatcggtgaagtgact
gatattgttgaaaaagaaatgtataccttcgcagataataacggtgacagcttaacgcta
cgccctgaaggtaccgcgtcgacagtgcgtgcaggtaacgaaaacggtctgctatataac
caagagcaacgtctttggtatatggggcctatgttccgccacgagcgcccacaaaaaggc
cgttatcgtcagtttaaccaatttggcgttgaagtgtatggcattggctcggctgatatt
gatgctgaagtcctaatgctatcggcacgtctgtgggaaaaactcggtattagcgagcac
gtctcattagagctaaataccttaggtgatcctgctgagcgcgctgtttatcgtgatgcc
ttaatagcgtttttagagctgcataaagatgcgctagatgaagacagtaagcgtcgcatg
tacagcaatccgctgcgagtattggattcaaaagatcaaaatgtccaagccatattggtt
gatgcacctgagttaatggattttctcggtgaagaatcgaagacacatttttcacaattg
cgtgaactacttgacgcagtgggtatcaaatacaccattaatccgcgtctagtacgtggt
ttagattactataatcgcactgtatttgaatgggttacatctagtttaggctcacaaggt
actgtacttgcgggggggcgctacgatggtttagtcgctcagttaggtggtaaagatact
ccagcggtcggttttgctatgggcttagagcgcattgtcttgctgcttgaaaccttagag
ctaaccaaagatattccgccagaagtggatgtgtatgtcacggccatgggtgatagctgt
ctggtcgaagccatcaaggtcgcgcaggaattacgtaacgcactgccaaaccttaaagtg
atgagtcactgtggcggcggtaacgtgaagaaacaaatgaagcgtgccgacaaaagcggt
gcgagtgtggcactactgataggtgaagatgaacttgccgaaggtatggttacggttaaa
catttacgcaatgacatcgaacaacaacgggtagctcgaagtgccttaggcgcatttttg
gctgaactgatcaaataa
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