Shewanella sp. WE21: CKQ84_15170
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Entry
CKQ84_15170 CDS
T05404
Name
(GenBank) TetR family transcriptional regulator
KO
K18301
TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor
Organism
shew
Shewanella sp. WE21
Brite
KEGG Orthology (KO) [BR:
shew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shew03000
]
CKQ84_15170
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
shew01504
]
CKQ84_15170
Transcription factors [BR:
shew03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
CKQ84_15170
Antimicrobial resistance genes [BR:
shew01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
CKQ84_15170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_C_7
TetR_N
LacI
HTH_Tnp_1_2
HTH_22
HTH_17
MerR
Motif
Other DBs
NCBI-ProteinID:
AVI67109
LinkDB
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Position
3448422..3449051
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AA seq
209 aa
AA seq
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MTHSSETQLPLSRSEQKRQQVLVAAIDLFCRQGFPHTSMDEVAKLAGVSKQTVYSHYGSK
DELFVAAIESKCVGHNLNDDLLSDPTKPESALTQFALQFGEMIVSPEAITVFKACVAQSE
SHPEVSRLFFDAGPKHIVGLLADYLVAVEALGQYRFGNAHHSAVRLCLMLFGELKLKLEL
GLVADELFDDRNHYILGCADMFLRAHRVE
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgacgcattcctctgagacgcaattacctttgagccgtagtgaacaaaaacgtcagcaa
gtccttgtggcagctattgatttgttttgtcgtcaaggtttccctcataccagtatggat
gaggttgcaaagcttgcgggcgtgtcgaaacaaaccgtatattcccattacggtagcaaa
gatgaattatttgttgcggcaattgaatctaagtgtgttggccataatcttaatgatgat
ttgttaagtgatcccactaaaccggaatcggcattaacccaatttgccttgcaatttggg
gagatgattgtcagtcctgaagctattactgtattcaaagcctgtgtggcgcaatccgaa
agtcatcctgaagtgtcgcgattgttctttgatgcaggccctaaacacatagtgggctta
ttggcggattatttagtcgctgtagaagcgttagggcaatatcgatttggtaatgctcac
catagtgcagtgcgtttatgtttaatgttgtttggtgagttaaaacttaaattagaattg
ggattagtggccgatgaactttttgacgacaggaatcattatatattgggttgtgctgac
atgttcttgagggcgcatcgggtagagtga
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