Shewanella sp. WE21: CKQ84_15410
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Entry
CKQ84_15410 CDS
T05404
Name
(GenBank) flagellar basal body M-ring protein FliF
KO
K02409
flagellar M-ring protein FliF
Organism
shew
Shewanella sp. WE21
Pathway
shew02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
shew00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CKQ84_15410
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
shew02044
]
CKQ84_15410
02035 Bacterial motility proteins [BR:
shew02035
]
CKQ84_15410
Secretion system [BR:
shew02044
]
Type III secretion system
Flagellar export apparatus
CKQ84_15410
Bacterial motility proteins [BR:
shew02035
]
Flagellar system
Flagellar assembly proteins
M, S, P and L rings
CKQ84_15410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YscJ_FliF
YscJ_FliF_C
Motif
Other DBs
NCBI-ProteinID:
AVI67155
LinkDB
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Position
3496401..3498101
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AA seq
566 aa
AA seq
DB search
MSTEMIVGSNSGLADQGVQQEHKSGMMGNLGGVDMMRQVTMILALAICLALAVFVMLWAQ
EPEYRPLGKMETQEMVQVLDVLDKNKVKYQIDVDVIKVPEDKYQEVKMMLSRAGIDSPAA
NQDFLNKDSGFGVSQRMEQARLKHSQEENLARAIEQLQSVSRAKVILALPKENVFARNAS
KPSATVVINTRRGGLGQGEVDAIVDIVASAVQGLEPSRVTVTDSNGRLLNSGSQDGASAT
ARRELELVQQKEAEYRTKIESILVPILGPDNFTSQVDVSMDFTAVEQTSKRFNPDLPALR
SEMTVENNTTGGSSGGIPGALSNQPPMESNIPEDATKAAESATAAAGNSHREATRNFELD
TTISHTRQQVGAVRRISVSVAVDFKPGAAGENGQVARVARTEQELTNIRRLLEGAVGFSS
QRGDVLEVVTVPFMDQLVEDLPAPELWEQPWFWRAIKLGIGALVILVLILAVVRPMLKRL
IYPDSVNMPEDGRLGNELAEIEDQYAADTLGMLNTQEAEYSYADDGSIHIPNLHKDDDMI
KAIRALVANEPELSTQVVKNWLQDNG
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
gtgagtacagaaatgattgtcggatccaattccggtttagctgaccaaggtgtccagcaa
gaacataagtcaggaatgatgggaaatcttggcggtgtcgatatgatgcgccaagtgact
atgattttagccttagcgatttgtttagccttggcggtatttgtcatgctgtgggcgcag
gagccagagtatcgtccattgggtaaaatggaaactcaggaaatggttcaagtgctagat
gtacttgataaaaataaagttaagtaccaaatcgacgtggacgttattaaagttcctgaa
gataaatatcaagaagtcaaaatgatgttgagccgtgcaggtatcgacagtcctgcagcc
aaccaagattttttgaataaagacagtggttttggtgtcagccaacgcatggaacaggct
cgtcttaagcatagccaagaagaaaacctcgcccgtgcgatagagcaactacaaagtgtc
agccgtgccaaagtcattcttgcgttacctaaagaaaacgtcttcgcccgcaatgcctct
aaaccgagtgcaactgtggtgatcaatacccgtcgcggtggcttaggccaaggtgaagtc
gatgctatcgtcgatattgttgcttctgcagtacaaggtttagaaccatcaagggtgacg
gtaactgactctaacggccgtttattgaactctggcagccaagatggcgcgtctgcgacg
gctcgccgtgaacttgaattagtacagcaaaaagaagctgaatatcgcactaagattgaa
tcgattctggtgccaattctaggtcctgataattttacctctcaagtcgacgtcagtatg
gattttactgctgttgagcaaacatcaaagcgttttaaccctgatttaccggcactgcgc
agtgaaatgaccgttgaaaataacaccactggcggctcttctggtgggatccctggcgcg
ttatccaatcaaccgccaatggagtctaatattccagaagatgcaacaaaagcggcagag
tcagcaacggctgcagcaggtaattcgcaccgcgaagcgacccgtaactttgaattagat
accaccattagccatactcgccagcaagttggtgcagtgcgccgcattagtgtgtcagtc
gcggtggactttaaacctggtgccgctggagaaaatggtcaagtagcccgtgttgcccgt
accgagcaagaactgaccaatatccgtcgtttgcttgaaggcgcggttggttttagttca
caacggggtgatgtgctggaagtggtaaccgttccctttatggatcaattggttgaagat
ttacccgcacctgaactttgggagcaaccttggttttggcgtgcgattaagcttgggatt
ggtgcgctagtgattttggtgctgattctagctgtggtacgtcctatgctgaaacgcttg
atctatcctgacagtgtgaatatgcctgaggatggcagattaggtaatgaattagccgaa
attgaggaccaatatgcggctgatacgctagggatgctcaatactcaagaggcggaatac
agttatgctgacgatggctcaattcatatccctaatcttcacaaagatgatgatatgatt
aaagctatccgtgcgctcgtggcgaatgagcctgagctctctactcaagtcgtgaaaaac
tggttacaagacaatggctga
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