Shewanella sp. WE21: CKQ84_15575
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Entry
CKQ84_15575 CDS
T05404
Name
(GenBank) sugar transporter
KO
K01991
polysaccharide biosynthesis/export protein
Organism
shew
Shewanella sp. WE21
Pathway
shew02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
shew00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CKQ84_15575
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shew02000
]
CKQ84_15575
Transporters [BR:
shew02000
]
Other transporters
Pores ion channels [TC:
1
]
CKQ84_15575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLBB
SLBB_2
Poly_export
Caps_syn_GfcC_C
Motif
Other DBs
NCBI-ProteinID:
AVI67187
LinkDB
All DBs
Position
3531110..3533596
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AA seq
828 aa
AA seq
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MLQQVKKFIILGISAAILMGAQANAITPSPQMIEQFKALPKSEQERLARQYGVDPSMITG
GSAAQTVVENPTVVTPRAANNDVVDQSESDQLNQATKSEAKVEAIEDKKENQLKRFGYDL
FAGSPSTFAPVSDVPVPAEYMIGPGDSLNVQLFGKENNQYTLTVGRDGAIQFPGLGPISL
VGLSFSEVRELLQQKISQSMIGIESNITMGELRSIRIFVAGDAFQPGSYTVSSLSTITQA
LFISGGVNQIGSLRDIQIKRAGKTVGRLDLYDLLLRGDASGDIRLQSGDVVFIPSSGGSV
SVIGEVRRPAIYELKNNETMADVIRMASGLNPGAYPKASTVERYSNESVKTVVSVDLTEN
LGLNTLVKNGDLLNVRSASSRIDNAITLAGAVVRPGKYQWTKGLTVADLLPSVWGDLTIS
ADLDYSLLVREINQRGDIQVERIALGRAIAEPKSHYNPKLNPRDSIIVFDYADREELLKP
IVKKLREQSRFGDAAKLVSINGNVRFPGQYPITINGDVKELLIAAGGLEEGAYTLSAELT
RQNVSEQNGVSVEHMQLSLDQVMQNVPTANVILQSRDILTVRTLPDWQETRWVTIKGEVK
FPGTYSIQRSESLKDVISRAGGLTSDAAPRSAVFLRKSVKDKEQLELSKLADELRREIAA
KALTKDTPTIGYNDAQLMLNQLENVKTVGRLVVDINAIQLGIDSANLMLEDEDALYIPAT
NQTVSVMGQVQHPSTHRYKQGLTFDQYLALSGGARKRADESRSYILRADGSVQMPESSMW
FSGGSAMEPGDTIVVPLDTEYKDNLTLWSQVTGIIYNTAVAVSVISGL
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
gtgctacaacaagtcaaaaaattcatcatactaggcataagtgccgcgattttgatgggc
gcgcaggctaatgccattacgccatctccacagatgatcgagcagttcaaagctttacct
aagtcagaacaagaaaggctagcacgtcaatatggcgttgacccttcgatgatcactggt
ggttcagctgctcaaacagtagttgaaaatccaactgtggtgactccacgtgctgccaat
aatgacgtagttgaccaatctgaaagtgaccagctaaaccaggcgacgaagtcagaggca
aaggttgaagctattgaagacaaaaaagaaaatcaactaaagcgttttggttacgatctc
tttgcgggttcgccaagcacttttgcaccagttagcgatgtgccagtgcctgctgagtac
atgattggtcccggtgatagcttaaatgttcagttgtttggtaaagagaataaccagtac
acgctaaccgttggtcgtgatggagcaattcaatttccgggtttagggccaatatcgctt
gttggtttgagtttttctgaagtacgcgaattgttacagcaaaaaattagccaaagtatg
attggcattgagtcaaatatcacaatgggcgaattacggtcaattcgtatctttgttgct
ggtgatgcttttcaaccaggctcctacactgtttctagtttatcgacgatcactcaagca
ttatttatttccggtggtgtgaatcaaattggtagtttgcgtgacatacaaattaaacga
gcaggtaaaaccgtaggtcgcctagatctctatgatttacttctgcgtggtgatgcatca
ggtgatattcgcttgcaatcaggtgatgtggtttttattccatcatcaggtggttcagtt
agcgtgattggtgaagttcgtcgtcctgctatatatgaacttaaaaataatgaaaccatg
gctgatgttattcgcatggccagtggtctaaatccgggtgcatatccaaaagcaagtaca
gttgaacgttatagtaatgaatcagttaaaactgtagtaagtgttgatttaacagaaaat
ttaggcctaaacacgttagtcaaaaatggcgacctcttaaatgtaagatctgcctctagc
cgtattgataatgcgattactctggcaggcgcagttgttcgtcctggcaaatatcaatgg
acgaaaggtttaactgttgccgatttacttccttcagtttggggggatctaaccatatcc
gctgatttggattattctttacttgtccgtgaaataaatcaacgcggtgatattcaagtt
gagcgtattgcgcttggacgagcgatagcagaacctaaatcacattataatcctaagcta
aatccgcgtgattcaatcattgtttttgattacgcagaccgtgaagagttattaaaacct
atagttaaaaaactgagagagcagagtcgtttcggcgatgccgctaagttagtcagcatc
aatggaaatgtgcgttttcctgggcaataccccattactattaatggcgatgttaaagaa
ttactcattgcggctggtggtttagaagaaggtgcctatacactttcggctgaattgact
cgtcaaaatgtttctgagcaaaacggtgtatcggttgaacatatgcagctgagcttagat
caggtcatgcaaaatgtaccaactgcaaacgttatactacaaagccgtgacatcctaact
gttcgcacgcttcctgattggcaggagactcgctgggtaactatcaagggtgaagttaag
tttcccggtacttacagtattcagcgtagcgaaagcttgaaagatgtgatatctcgcgca
ggtggtttgacgagcgatgcagctcctcgcagtgctgtatttttacgtaagtcagtaaaa
gataaagagcagcttgagttatcaaaacttgctgatgaattacgtcgtgaaatcgccgct
aaagcattgacaaaagatacaccaaccattggttataacgatgcgcagctgatgttaaat
cagcttgaaaatgttaaaactgtcggtcgattagttgttgatatcaatgcaatccagctg
ggtatcgatagtgccaaccttatgcttgaagatgaggatgcgttgtatatccctgcgact
aatcaaaccgtgtcagtcatgggccaagtacagcacccaagcacacatagatataaacaa
ggtttaacattcgaccaatatttagcattatccggtggcgcacgtaaacgtgccgatgaa
tcacgctcatatattttaagggctgatggctcagttcaaatgcccgaatcttcgatgtgg
tttagtggtggtagtgccatggaaccaggcgataccatagttgtaccattagatactgaa
tataaagacaacttaacgctttggagtcaagtcactggcattatctacaatactgctgtt
gcagtgtctgtaatctcagggctctag
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