KEGG   Shewanella sp. WE21: CKQ84_16025
Entry
CKQ84_16025       CDS       T05404                                 
Name
(GenBank) histone
  KO
K03746  DNA-binding protein H-NS
Organism
shew  Shewanella sp. WE21
Brite
KEGG Orthology (KO) [BR:shew00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:shew03036]
    CKQ84_16025
   03400 DNA repair and recombination proteins [BR:shew03400]
    CKQ84_16025
Chromosome and associated proteins [BR:shew03036]
 Prokaryotic type
  Nucleoid associated proteins
   HNS (histone-like nucleoid structuring protein)
    CKQ84_16025
DNA repair and recombination proteins [BR:shew03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      CKQ84_16025
SSDB
Motif
Pfam: Histone_HNS_N Histone_HNS YkyA OKR_DC_1_C DUF6842
Other DBs
NCBI-ProteinID: AVI67272
LinkDB
Position
complement(3607853..3608245)
AA seq 130 aa
MSEFLEILTHGRRFKAAVKELSVEELRDLADKLDKILVERESMAEEEEQAMAARNAKIEE
IRQQMEAVGLSIDDLGGVAVKAAAKKRAPRPAKYQIEVDGEMVQWTGQGRMPTVFKNEIN
KGRSMEDFLI
NT seq 393 nt   +upstreamnt  +downstreamnt
atgagcgaatttttagagatattaactcacggccgtcgttttaaagctgcagtaaaagaa
cttagcgttgaagagttacgtgatttagccgacaaattagataaaattttagtagaacgc
gagtctatggctgaggaagaagaacaagccatggcagctcgtaatgctaagattgaagaa
atccgtcaacaaatggaagccgttggtttatcaattgatgacttaggtggcgtagctgtt
aaagctgctgcgaagaaacgcgctcctcgtccagccaaataccaaattgaagttgacggt
gaaatggttcaatggactggccaaggccgtatgcctaccgtatttaagaacgagatcaac
aaaggtcgttctatggaagatttcttaatctaa

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