Shewanella sp. WE21: CKQ84_16025
Help
Entry
CKQ84_16025 CDS
T05404
Name
(GenBank) histone
KO
K03746
DNA-binding protein H-NS
Organism
shew
Shewanella sp. WE21
Brite
KEGG Orthology (KO) [BR:
shew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
shew03036
]
CKQ84_16025
03400 DNA repair and recombination proteins [BR:
shew03400
]
CKQ84_16025
Chromosome and associated proteins [BR:
shew03036
]
Prokaryotic type
Nucleoid associated proteins
HNS (histone-like nucleoid structuring protein)
CKQ84_16025
DNA repair and recombination proteins [BR:
shew03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CKQ84_16025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone_HNS_N
Histone_HNS
YkyA
OKR_DC_1_C
DUF6842
Motif
Other DBs
NCBI-ProteinID:
AVI67272
LinkDB
All DBs
Position
complement(3607853..3608245)
Genome browser
AA seq
130 aa
AA seq
DB search
MSEFLEILTHGRRFKAAVKELSVEELRDLADKLDKILVERESMAEEEEQAMAARNAKIEE
IRQQMEAVGLSIDDLGGVAVKAAAKKRAPRPAKYQIEVDGEMVQWTGQGRMPTVFKNEIN
KGRSMEDFLI
NT seq
393 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaatttttagagatattaactcacggccgtcgttttaaagctgcagtaaaagaa
cttagcgttgaagagttacgtgatttagccgacaaattagataaaattttagtagaacgc
gagtctatggctgaggaagaagaacaagccatggcagctcgtaatgctaagattgaagaa
atccgtcaacaaatggaagccgttggtttatcaattgatgacttaggtggcgtagctgtt
aaagctgctgcgaagaaacgcgctcctcgtccagccaaataccaaattgaagttgacggt
gaaatggttcaatggactggccaaggccgtatgcctaccgtatttaagaacgagatcaac
aaaggtcgttctatggaagatttcttaatctaa
DBGET
integrated database retrieval system